RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 H7BYZ3 331 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 ADAP1O75689 374 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 PYDC2Q56P42 97 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 MCFD2Q8NI22 146 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
CDRT1-205ENST00000475944 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
CDRT1-205ENST00000475944 RPUSD4Q96CM3 377 aaKnown RBP7.56□□□□□ -1.2
CDRT1-205ENST00000475944 UHRF2Q96PU4 802 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 Q9H8V8 135 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 NOP10Q9NPE3 64 aaKnown RBP7.56□□□□□ -1.2
CDRT1-205ENST00000475944 PSENENQ9NZ42 101 aa7.56□□□□□ -1.2
CDRT1-205ENST00000475944 CXCL2P19875 107 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
CDRT1-205ENST00000475944 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDRT1-205ENST00000475944 ID3Q02535 119 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 OR5I1Q13606 314 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 LCN15Q6UWW0 184 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 Q8N1X5 172 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 GNPNAT1Q96EK6 184 aaPredicted RBP7.55□□□□□ -1.2
CDRT1-205ENST00000475944 ZNF503Q96F45 646 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 NPVFQ9HCQ7 196 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 HSPG2P98160 4391 aa7.55□□□□□ -1.2
CDRT1-205ENST00000475944 FNDC10F2Z333 226 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 K7EPK0 472 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 M6PRP20645 277 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 UBE2MP61081 183 aaKnown RBP7.54□□□□□ -1.2
CDRT1-205ENST00000475944 DLK1P80370 383 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 PXDC1Q5TGL8 231 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 CCDC28AQ8IWP9 274 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 RXFP4Q8TDU9 374 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 SLC50A1Q9BRV3 221 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 ARL6Q9H0F7 186 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 ARV1Q9H2C2 271 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 Q9H3A6 140 aa7.54□□□□□ -1.2
CDRT1-205ENST00000475944 ZNF331Q9NQX6 463 aaPredicted RBP7.54□□□□□ -1.2
CDRT1-205ENST00000475944 ABCA13Q86UQ4 5058 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 TRAV26-1A0A087WT03 109 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 H3BMQ9 156 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 SSSCA1O60232 199 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
CDRT1-205ENST00000475944 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 OR10P1Q8NGE3 313 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 SMIM8Q96KF7 97 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 MGAT4CQ9UBM8 478 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 V9GYH0 126 aa7.53□□□□□ -1.2
CDRT1-205ENST00000475944 A0A1W2PPQ1 181 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GAGE12BA1L429 117 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 C9orf170A2RU37 121 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 H3BNG1 76 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 ZNF701M0R085 212 aaPredicted RBP7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GOSR2O14653 212 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 MRPS12O15235 138 aaKnown RBP7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GAGE7O76087 117 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 RLN2P04090 185 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 METTL15P1P0C7V9 234 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GAGE12FP0CL80 117 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GAGE12GP0CL81 117 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 GAGE12IP0CL82 117 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 PRB4P10163 310 aaPredicted RBP7.52□□□□□ -1.21
CDRT1-205ENST00000475944 BTF3P20290 206 aaKnown RBP7.52□□□□□ -1.21
CDRT1-205ENST00000475944 SLC38A11Q08AI6 406 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 ZNF546Q86UE3 836 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 CCDC190Q86UF4 302 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 KRTAP1-5Q9BYS1 174 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
CDRT1-205ENST00000475944 A0A0J9YY99 117 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 CCNKO75909 580 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 S100A5P33763 92 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 GFI1BQ5VTD9 330 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 TMEM14EPQ6UXP3 125 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 LINC00305Q7Z4B0 112 aa7.51□□□□□ -1.21
CDRT1-205ENST00000475944 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
CDRT1-205ENST00000475944 AGPAT2O15120 278 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 COX7A2P2O60397 106 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 TSC22D2O75157 780 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 SCGB1D2O95969 90 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 HOXA5P20719 270 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 TAS2R30P59541 319 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 KIR3DS1Q14943 382 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 ESRGQ1W209 222 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 PARD6GQ9BYG4 376 aaPredicted RBP7.5□□□□□ -1.21
CDRT1-205ENST00000475944 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
CDRT1-205ENST00000475944 LRP1BQ9NZR2 4599 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 SLC17A3O00476 420 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 NDUFB6O95139 128 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 SNRPCP09234 159 aaKnown RBP7.49□□□□□ -1.21
CDRT1-205ENST00000475944 LEPP41159 167 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 INPP1P49441 399 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 KRTAP10-2P60368 255 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 DAZ2Q13117 558 aaKnown RBP7.49□□□□□ -1.21
CDRT1-205ENST00000475944 C4orf46Q504U0 113 aa7.49□□□□□ -1.21
CDRT1-205ENST00000475944 ODF3Q96PU9 254 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms