RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 SIGLEC15Q6ZMC9 328 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 Q6ZTI0 123 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 HSD17B13Q7Z5P4 300 aaPredicted RBP3.06□□□□□ -1.92
USP4-209ENST00000475873 COMMD7Q86VX2 200 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 AQP12AQ8IXF9 295 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 ZFP41Q8N8Y5 198 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 HSD17B11Q8NBQ5 300 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 OR52I1Q8NGK6 324 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 SMIM19Q96E16 107 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 C16orf74Q96GX8 76 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 GINS4Q9BRT9 223 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 RSG1Q9BU20 258 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 AMBNQ9NP70 447 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 HEYLQ9NQ87 328 aaPredicted RBP3.06□□□□□ -1.92
USP4-209ENST00000475873 GHRLQ9UBU3 117 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 ELF5Q9UKW6 265 aaPredicted RBP3.06□□□□□ -1.92
USP4-209ENST00000475873 RCL1Q9Y2P8 373 aaKnown RBP3.06□□□□□ -1.92
USP4-209ENST00000475873 OR2W1Q9Y3N9 320 aa3.06□□□□□ -1.92
USP4-209ENST00000475873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.06□□□□□ -1.92
USP4-209ENST00000475873 K7EP13 123 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 RBFOX2O43251 390 aaKnown RBP eCLIP3.05□□□□□ -1.92
USP4-209ENST00000475873 EIF3GO75821 320 aaKnown RBP eCLIP3.05□□□□□ -1.92
USP4-209ENST00000475873 PTTG1O95997 202 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 ALPLP05186 524 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 H2AFB1P0C5Y9 115 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 UBBP0CG47 229 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 ANXA7P20073 488 aaKnown RBP3.05□□□□□ -1.92
USP4-209ENST00000475873 S100A7P31151 101 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 RPS19P39019 145 aaKnown RBP3.05□□□□□ -1.92
USP4-209ENST00000475873 PSMB3P49720 205 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 TAS2R31P59538 309 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 ZFP69Q49AA0 526 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 GCSAMLQ5JQS6 135 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 TTC23Q5W5X9 447 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 OR8G2PQ6IF36 304 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 C9orf47Q6ZRZ4 202 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 ACOT7LQ6ZUV0 252 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 MTURNQ8N3F0 131 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 NANOGP1Q8N7R0 232 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 TMEM263Q8WUH6 116 aaKnown RBP3.05□□□□□ -1.92
USP4-209ENST00000475873 SFT2D1Q8WV19 159 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 APH1BQ8WW43 257 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 GFI1Q99684 422 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 GABARAPL3Q9BY60 117 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 MRPS26Q9BYN8 205 aaKnown RBP3.05□□□□□ -1.92
USP4-209ENST00000475873 SLC25A39Q9BZJ4 359 aaPredicted RBP3.05□□□□□ -1.92
USP4-209ENST00000475873 ARV1Q9H2C2 271 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 DOK5Q9P104 306 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 COPZ2Q9P299 210 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 CKLFQ9UBR5 152 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 OR51B2Q9Y5P1 312 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 ICOSQ9Y6W8 199 aa3.05□□□□□ -1.92
USP4-209ENST00000475873 DISC1C4P0D8 188 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 FKBP6O75344 327 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 ZNF324O75467 553 aaPredicted RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 SLC22A5O76082 557 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 GATA2P23769 480 aaPredicted RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 RPL5P46777 297 aaKnown RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 NPBWR1P48145 328 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 PPT1P50897 306 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 SMN1Q16637 294 aaKnown RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 CDNFQ49AH0 187 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 SAMD13Q5VXD3 122 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 SPATA31B1PQ5VZV4 182 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 DGAT2L7PQ6IED9 249 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 Q6ZS49 121 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 Q8N3U1 123 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 C10orf126Q8N4M7 172 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 THAP8Q8NA92 274 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 ZNF485Q8NCK3 441 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 BAALCQ8WXS3 180 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 SFRP2Q96HF1 295 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 TMEM56Q96MV1 263 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 LINC01587Q99440 93 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 CCL28Q9NRJ3 127 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 SSR3Q9UNL2 185 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 CSDC2Q9Y534 153 aaKnown RBP3.04□□□□□ -1.92
USP4-209ENST00000475873 TMEM56-RWDD3S4R434 201 aa3.04□□□□□ -1.92
USP4-209ENST00000475873 PNMA8CA0A1B0GUJ8 204 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 LINC00862A6NCI5 91 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 TMEM235A6NFC5 223 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 RBFOX3A6NFN3 312 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 PAX4O43316 350 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 PAGE4O60829 102 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 PRAF2O60831 178 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 NXPH3O95157 252 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 HPRT1P00492 218 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 METTL15P1P0C7V9 234 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 IGLC1P0CG04 106 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 MALP21145 153 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 S100GP29377 79 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 DDTP30046 118 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 CRYBA4P53673 196 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 PKIAP61925 76 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 SRSF3P84103 164 aaKnown RBP3.03□□□□□ -1.92
USP4-209ENST00000475873 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 BTN1A1Q13410 526 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 SSX1Q16384 188 aa3.03□□□□□ -1.92
USP4-209ENST00000475873 ATP6V1FQ16864 119 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms