RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 NAV3Q8IVL0 2385 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 NDUFS8O00217 210 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 NMUP48645 174 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 LYZP61626 148 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 PSMG4Q5JS54 123 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 C8orf31Q8N9H6 132 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 TNFRSF14Q92956 283 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 K7EQM0 130 aa14.05□□□□□ -0.16
CCM2-207ENST00000475551 SERTM2A0A1B0GWG4 89 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 MC5RP33032 325 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 TCTAP57738 103 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 PSG3Q16557 428 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 C3orf36Q3SXR2 165 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 PRSS57Q6UWY2 283 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 TPPP3Q9BW30 176 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 HIGD1BQ9P298 99 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 CFAP47Q6ZTR5 3102 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 TRBV19A0A075B6N1 114 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 IGHV3-21A0A0B4J1V1 117 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 WT1P19544 449 aaPredicted RBP14.04□□□□□ -0.16
CCM2-207ENST00000475551 RITA1Q96K30 269 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 CACNA1GO43497 2377 aa14.04□□□□□ -0.16
CCM2-207ENST00000475551 TEX48A0A1B0GUV7 120 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 RPL27AP46776 148 aaKnown RBP14.03□□□□□ -0.16
CCM2-207ENST00000475551 TMEM200BQ69YZ2 307 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 LYPD1Q8N2G4 141 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 NDUFS7O75251 213 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 RPL24P83731 157 aaKnown RBP14.03□□□□□ -0.16
CCM2-207ENST00000475551 AMN1Q8IY45 258 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 NGBQ9NPG2 151 aa14.03□□□□□ -0.16
CCM2-207ENST00000475551 PPIAL4CA0A0B4J2A2 164 aa14.02□□□□□ -0.16
CCM2-207ENST00000475551 NKX2-8O15522 239 aa14.02□□□□□ -0.16
CCM2-207ENST00000475551 GNG7O60262 68 aa14.02□□□□□ -0.16
CCM2-207ENST00000475551 LYZL1Q6UWQ5 148 aa14.02□□□□□ -0.16
CCM2-207ENST00000475551 THBDP07204 575 aa14.02□□□□□ -0.17
CCM2-207ENST00000475551 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.17
CCM2-207ENST00000475551 SIGLEC15Q6ZMC9 328 aa14.02□□□□□ -0.17
CCM2-207ENST00000475551 SIGMAR1Q99720 223 aa14.02□□□□□ -0.17
CCM2-207ENST00000475551 F11RQ9Y624 299 aaKnown RBP14.02□□□□□ -0.17
CCM2-207ENST00000475551 TMEM213A2RRL7 107 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 SHISA9B4DS77 424 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 VGLL1Q99990 258 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 AZU1P20160 251 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 FXYD7P58549 80 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 BCL6BQ8N143 479 aaPredicted RBP14.01□□□□□ -0.17
CCM2-207ENST00000475551 ASCL2Q99929 193 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 DKK2Q9UBU2 259 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 SMPXQ9UHP9 88 aa14.01□□□□□ -0.17
CCM2-207ENST00000475551 FCGR2BP31994 310 aaPredicted RBP14□□□□□ -0.17
CCM2-207ENST00000475551 FXYD2P54710 66 aa14□□□□□ -0.17
CCM2-207ENST00000475551 WI2-2373I1.2A0A1W2PRP0 233 aa14□□□□□ -0.17
CCM2-207ENST00000475551 K7EM74 188 aa14□□□□□ -0.17
CCM2-207ENST00000475551 GCSHP23434 173 aa14□□□□□ -0.17
CCM2-207ENST00000475551 C17orf77Q96MU5 243 aa14□□□□□ -0.17
CCM2-207ENST00000475551 SHANK2-AS3Q9BTD1 123 aa14□□□□□ -0.17
CCM2-207ENST00000475551 LAMA5O15230 3695 aa14□□□□□ -0.17
CCM2-207ENST00000475551 FCN3O75636 299 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 CRYGBP07316 175 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 PHLDA1Q8WV24 401 aaPredicted RBP13.99□□□□□ -0.17
CCM2-207ENST00000475551 TMEM133Q9H2Q1 129 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 ZMAT4Q9H898 229 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 APELAP0DMC3 54 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 TM4SF20Q53R12 229 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 RASL11BQ9BPW5 248 aa13.99□□□□□ -0.17
CCM2-207ENST00000475551 URB1O60287 2271 aaKnown RBP13.98□□□□□ -0.17
CCM2-207ENST00000475551 LOC400499M0QZD8 3231 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
CCM2-207ENST00000475551 H3BRN7 92 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 ENSAO43768 121 aaKnown RBP13.98□□□□□ -0.17
CCM2-207ENST00000475551 C8orf49Q96NF6 230 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 CEP295Q9C0D2 2601 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 DMXL2Q8TDJ6 3036 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 NPYP01303 97 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 CD300EQ496F6 205 aaPredicted RBP13.98□□□□□ -0.17
CCM2-207ENST00000475551 SEM1Q6ZVN7 128 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 GTSF1LQ9H1H1 148 aa13.98□□□□□ -0.17
CCM2-207ENST00000475551 INTS1Q8N201 2190 aaKnown RBP13.98□□□□□ -0.17
CCM2-207ENST00000475551 CKS2P33552 79 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 CCL11P51671 97 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 ZNF474Q6S9Z5 364 aaPredicted RBP13.97□□□□□ -0.17
CCM2-207ENST00000475551 FOXI2Q6ZQN5 318 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 HHLA3Q9XRX5 114 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 MBD3L4A6NDZ8 208 aaPredicted RBP13.97□□□□□ -0.17
CCM2-207ENST00000475551 MBD3L3A6NE82 208 aaPredicted RBP13.97□□□□□ -0.17
CCM2-207ENST00000475551 LINC01546A6NGU7 62 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 MBD3L5A6NJ08 208 aaPredicted RBP13.97□□□□□ -0.17
CCM2-207ENST00000475551 VSTM5A8MXK1 200 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 F8W1H4 67 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 I3L2K1 104 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 GOSR1O95249 250 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 MBD3L2Q8NHZ7 208 aaPredicted RBP13.97□□□□□ -0.17
CCM2-207ENST00000475551 TM2D2Q9BX73 214 aa13.97□□□□□ -0.17
CCM2-207ENST00000475551 PPIAL4EA0A075B759 164 aa13.96□□□□□ -0.17
CCM2-207ENST00000475551 IGKV2D-26A0A0A0MRZ7 120 aa13.96□□□□□ -0.17
CCM2-207ENST00000475551 IGKV1-17P01599 117 aa13.96□□□□□ -0.17
CCM2-207ENST00000475551 PPIAL4FP0DN26 164 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms