RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 NDUFB6O95139 128 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 BTF3P20290 206 aaKnown RBP12.43□□□□□ -0.42
PCGF3-209ENST00000475288 PLP1P60201 277 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 TTC32Q5I0X7 151 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 ZNF738Q8NE65 137 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 OR8A1Q8NGG7 326 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 SHANK2-AS3Q9BTD1 123 aa12.43□□□□□ -0.42
PCGF3-209ENST00000475288 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
PCGF3-209ENST00000475288 PAIP2BQ9ULR5 123 aaKnown RBP12.43□□□□□ -0.42
PCGF3-209ENST00000475288 A0A087X0K7 114 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 GATA2P23769 480 aaPredicted RBP12.42□□□□□ -0.42
PCGF3-209ENST00000475288 FCN2Q15485 313 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 IGFL4Q6B9Z1 124 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 SSX7Q7RTT5 188 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 LINC01587Q99440 93 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 Q9H8V8 135 aa12.42□□□□□ -0.42
PCGF3-209ENST00000475288 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 TCRBP04435 133 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 CXCL3P19876 107 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 RAP2BP61225 183 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 AKR1C1Q04828 323 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 CLINT1Q14677 625 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 S100A7AQ86SG5 101 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 LINC00612Q8N6U2 182 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 OR10J6PQ8NGY7 276 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
PCGF3-209ENST00000475288 TMEM263Q8WUH6 116 aaKnown RBP12.41□□□□□ -0.42
PCGF3-209ENST00000475288 C20orf144Q9BQM9 153 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 Q9H3A6 140 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 RNF24Q9Y225 148 aa12.41□□□□□ -0.42
PCGF3-209ENST00000475288 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 WRBO00258 174 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 HIST1H1AQ02539 215 aaPredicted RBP12.4□□□□□ -0.42
PCGF3-209ENST00000475288 FGL1Q08830 312 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 CYP2G1PQ6ZSU1 146 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 ACOT7LQ6ZUV0 252 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 HIGD1AQ9Y241 93 aa12.4□□□□□ -0.42
PCGF3-209ENST00000475288 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
PCGF3-209ENST00000475288 H3BNG1 76 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 HYPMO75409 117 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 CDKN1BP46527 198 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 SELENOTP62341 195 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 RHOBP62745 196 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 PSG3Q16557 428 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 Q6ZNX1 250 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 TMED4Q7Z7H5 227 aa12.39□□□□□ -0.43
PCGF3-209ENST00000475288 H7BYZ3 331 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 K7EPK0 472 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 ADAP1O75689 374 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 IL5P05113 134 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 CXCL2P19875 107 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 VAMP1P23763 118 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 KRTAP1-5Q9BYS1 174 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 C20orf85Q9H1P6 137 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 NUDT15Q9NV35 164 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
PCGF3-209ENST00000475288 SFT2D2O95562 160 aa12.37□□□□□ -0.43
PCGF3-209ENST00000475288 LINC00869P0C866 280 aa12.37□□□□□ -0.43
PCGF3-209ENST00000475288 M6PRP20645 277 aa12.37□□□□□ -0.43
PCGF3-209ENST00000475288 UBE2MP61081 183 aaKnown RBP12.37□□□□□ -0.43
PCGF3-209ENST00000475288 C4orf46Q504U0 113 aa12.37□□□□□ -0.43
PCGF3-209ENST00000475288 GNPNAT1Q96EK6 184 aaPredicted RBP12.37□□□□□ -0.43
PCGF3-209ENST00000475288 NOP10Q9NPE3 64 aaKnown RBP12.37□□□□□ -0.43
PCGF3-209ENST00000475288 FNDC10F2Z333 226 aa12.36□□□□□ -0.43
PCGF3-209ENST00000475288 H3BP45 60 aa12.36□□□□□ -0.43
PCGF3-209ENST00000475288 PRAF2O60831 178 aa12.36□□□□□ -0.43
PCGF3-209ENST00000475288 H2AFB2P0C5Z0 115 aa12.36□□□□□ -0.43
PCGF3-209ENST00000475288 ID3Q02535 119 aa12.36□□□□□ -0.43
PCGF3-209ENST00000475288 RPUSD4Q96CM3 377 aaKnown RBP12.36□□□□□ -0.43
PCGF3-209ENST00000475288 HERC1Q15751 4861 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 INMT-MINDY4F8WBC2 141 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
PCGF3-209ENST00000475288 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 PXDC1Q5TGL8 231 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
PCGF3-209ENST00000475288 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
PCGF3-209ENST00000475288 HOXB5P09067 269 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 OR5G3P0C626 314 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 HTN1P15515 57 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 UHRF2Q96PU4 802 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 NPVFQ9HCQ7 196 aa12.34□□□□□ -0.43
PCGF3-209ENST00000475288 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
PCGF3-209ENST00000475288 SMCO3A2RU48 225 aa12.33□□□□□ -0.44
PCGF3-209ENST00000475288 C7orf66A4D0T2 115 aa12.33□□□□□ -0.44
PCGF3-209ENST00000475288 DLK1P80370 383 aa12.33□□□□□ -0.44
PCGF3-209ENST00000475288 OR5I1Q13606 314 aa12.33□□□□□ -0.44
PCGF3-209ENST00000475288 ESRGQ1W209 222 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms