RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 FAM122CQ6P4D5 195 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 HYLS1Q96M11 299 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 LINC00052Q96N35 136 aa11.63□□□□□ -0.55
COL1A1-204ENST00000474644 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-204ENST00000474644 DNAH9Q9NYC9 4486 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 EIF3GO75821 320 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL1A1-204ENST00000474644 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
COL1A1-204ENST00000474644 DEFB1P60022 68 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 GUK1Q16774 197 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 HAGHQ16775 308 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-204ENST00000474644 ZFP69Q49AA0 526 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 LRRC20Q8TCA0 184 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 ZNF331Q9NQX6 463 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-204ENST00000474644 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
COL1A1-204ENST00000474644 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 OR7C2O60412 319 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 MBP02144 154 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
COL1A1-204ENST00000474644 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 TMEM41BQ5BJD5 291 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
COL1A1-204ENST00000474644 RPP25LQ8N5L8 163 aaKnown RBP11.61□□□□□ -0.55
COL1A1-204ENST00000474644 SAT2Q96F10 170 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-204ENST00000474644 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 OR51M1Q9H341 326 aa11.61□□□□□ -0.55
COL1A1-204ENST00000474644 A0A1W2PPV4 95 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 OR10J4P0C629 311 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 SPP1P10451 314 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-204ENST00000474644 TAS2R45P59539 299 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 GDF5OSQ5U4N7 250 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 STHQ8IWL8 128 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 SAV1Q9H4B6 383 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-204ENST00000474644 RPRMQ9NS64 109 aa11.6□□□□□ -0.55
COL1A1-204ENST00000474644 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 F6UB75 175 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 ZNF253O75346 499 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 NDUFB4O95168 129 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 HLA-DRB4P13762 266 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 APOC4P55056 127 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
COL1A1-204ENST00000474644 PDE6HQ13956 83 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 PSG3Q16557 428 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 RNF141Q8WVD5 230 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 TM2D3Q9BRN9 247 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
COL1A1-204ENST00000474644 A0A0J9YX75 114 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 HMGB3O15347 200 aaKnown RBP11.58□□□□□ -0.56
COL1A1-204ENST00000474644 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-204ENST00000474644 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.56
COL1A1-204ENST00000474644 EIF5AP63241 154 aaKnown RBP11.58□□□□□ -0.56
COL1A1-204ENST00000474644 AKR1C8PQ5T2L2 129 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 SSX7Q7RTT5 188 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 BAP18Q8IXM2 172 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 STOML3Q8TAV4 291 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 RAB24Q969Q5 203 aa11.58□□□□□ -0.56
COL1A1-204ENST00000474644 H3BMM0 161 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 NBEAP1P0C6P0 100 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 SEC11BP0C7V7 166 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 STAG3L2P0CL84 134 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 STAG3L3P0CL85 134 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 PHYHIPLQ96FC7 376 aa11.57□□□□□ -0.56
COL1A1-204ENST00000474644 ACTR3CQ9C0K3 210 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-204ENST00000474644 ARL14EPLP0DKL9 152 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 PRB4P10163 310 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-204ENST00000474644 PSG9Q00887 426 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
COL1A1-204ENST00000474644 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 CSTL1Q9H114 145 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 RETNQ9HD89 108 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
COL1A1-204ENST00000474644 ZNF705FA8MVS1 300 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-204ENST00000474644 UBE2CO00762 179 aa11.55□□□□□ -0.56
COL1A1-204ENST00000474644 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-204ENST00000474644 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
COL1A1-204ENST00000474644 C4BPBP20851 252 aa11.55□□□□□ -0.56
COL1A1-204ENST00000474644 NKX2-5P52952 324 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-204ENST00000474644 OR4B1Q8NGF8 309 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms