RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 IGLV2-11P01706 119 aa16.88■□□□□ 0.29
CCM2-206ENST00000474617 NHLRC2Q8NBF2 726 aa16.88■□□□□ 0.29
CCM2-206ENST00000474617 SLC50A1Q9BRV3 221 aa16.88■□□□□ 0.29
CCM2-206ENST00000474617 ZNF331Q9NQX6 463 aaPredicted RBP16.88■□□□□ 0.29
CCM2-206ENST00000474617 FAM208BQ5VWN6 2430 aa16.88■□□□□ 0.29
CCM2-206ENST00000474617 NPIPB6E9PJ23 425 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 H3BTX0 84 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 BUB3O43684 328 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 TGFAP01135 160 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 SNRPCP09234 159 aaKnown RBP16.87■□□□□ 0.29
CCM2-206ENST00000474617 C9orf152Q5JTZ5 239 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 COX8CQ7Z4L0 72 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 MRPL18Q9H0U6 180 aaKnown RBP16.87■□□□□ 0.29
CCM2-206ENST00000474617 GNB4Q9HAV0 340 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 EPG5Q9HCE0 2579 aa16.87■□□□□ 0.29
CCM2-206ENST00000474617 AVPP01185 164 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 S100A12P80511 92 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 LY6EQ16553 131 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 SAPCD1Q5SSQ6 148 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 PSG8Q9UQ74 426 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 SNURFLB1AK76 121 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 FSHBP01225 129 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 IER3P46695 156 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 PRR27Q6MZM9 219 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 GBGT1Q8N5D6 347 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 MRPL53Q96EL3 112 aaKnown RBP16.86■□□□□ 0.29
CCM2-206ENST00000474617 MS4A10Q96PG2 267 aa16.86■□□□□ 0.29
CCM2-206ENST00000474617 SH2D7A6NKC9 451 aaPredicted RBP16.85■□□□□ 0.29
CCM2-206ENST00000474617 NDUFA4O00483 81 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 IGHV4-31P0DP07 118 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 TPPP2P59282 170 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 Q5PR19 223 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 C17orf77Q96MU5 243 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 U3KQE9 123 aa16.85■□□□□ 0.29
CCM2-206ENST00000474617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.84■□□□□ 0.29
CCM2-206ENST00000474617 IGLV1-40P01703 118 aa16.84■□□□□ 0.29
CCM2-206ENST00000474617 CBLN1P23435 193 aa16.84■□□□□ 0.29
CCM2-206ENST00000474617 PRNTQ86SH4 94 aa16.84■□□□□ 0.29
CCM2-206ENST00000474617 GPR61Q9BZJ8 451 aa16.84■□□□□ 0.29
CCM2-206ENST00000474617 RBAKDNA6NC62 111 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 IFITM10A6NMD0 228 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 CT45A10P0DMU9 189 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 COL8A1P27658 744 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 ARL3P36405 182 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 Q6AWC8 147 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 C16orf54Q6UWD8 224 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 TMEM136Q6ZRR5 245 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 CIARTQ8N365 385 aaPredicted RBP16.83■□□□□ 0.28
CCM2-206ENST00000474617 TMEM18Q96B42 140 aa16.83■□□□□ 0.28
CCM2-206ENST00000474617 ASH1LQ9NR48 2969 aaKnown RBP16.82■□□□□ 0.28
CCM2-206ENST00000474617 CLPSL1A2RUU4 121 aa16.82■□□□□ 0.28
CCM2-206ENST00000474617 RNF223E7ERA6 249 aa16.82■□□□□ 0.28
CCM2-206ENST00000474617 Q0VG73 95 aa16.82■□□□□ 0.28
CCM2-206ENST00000474617 NUP35Q8NFH5 326 aa16.82■□□□□ 0.28
CCM2-206ENST00000474617 NEU1Q99519 415 aa16.82■□□□□ 0.28
CCM2-206ENST00000474617 ANKRD17O75179 2603 aaKnown RBP16.82■□□□□ 0.28
CCM2-206ENST00000474617 ZNF785A8K8V0 405 aa16.81■□□□□ 0.28
CCM2-206ENST00000474617 CRISP2P16562 243 aa16.81■□□□□ 0.28
CCM2-206ENST00000474617 FOXA3P55318 350 aaPredicted RBP16.81■□□□□ 0.28
CCM2-206ENST00000474617 CFHR3Q02985 330 aa16.81■□□□□ 0.28
CCM2-206ENST00000474617 DEFB112Q30KQ8 113 aa16.81■□□□□ 0.28
CCM2-206ENST00000474617 BCL6BQ8N143 479 aaPredicted RBP16.81■□□□□ 0.28
CCM2-206ENST00000474617 HIST1H2BLQ99880 126 aa16.81■□□□□ 0.28
CCM2-206ENST00000474617 HIGD1CA8MV81 97 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 TCL1AP56279 114 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 RBPMS2Q6ZRY4 209 aaKnown RBP16.8■□□□□ 0.28
CCM2-206ENST00000474617 PACRGQ96M98 296 aaPredicted RBP16.8■□□□□ 0.28
CCM2-206ENST00000474617 PRDM13Q9H4Q3 707 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 SMAD5-AS1Q9Y6J3 95 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 A0A1B0GW15 77 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 A0A1W2PS18 150 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 ESDP10768 282 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 OR10J3Q5JRS4 329 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 GFI1BQ5VTD9 330 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 CYB5R2Q6BCY4 276 aa16.8■□□□□ 0.28
CCM2-206ENST00000474617 TRAV8-1A0A0A6YYK1 113 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 FABP4P15090 132 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 OR10D4PQ8NGN7 298 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 SGK494Q96LW2 274 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 NDFIP1Q9BT67 221 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 VPREB3Q9UKI3 123 aa16.79■□□□□ 0.28
CCM2-206ENST00000474617 CHEK1O14757 476 aa16.78■□□□□ 0.28
CCM2-206ENST00000474617 BLCAPP62952 87 aa16.78■□□□□ 0.28
CCM2-206ENST00000474617 A0A1B0GXF2 115 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 M0R3E3 92 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 CA1P00915 261 aaPredicted RBP16.77■□□□□ 0.28
CCM2-206ENST00000474617 IGHG4P01861 327 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 APCSP02743 223 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 PF4V1P10720 104 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 KRTAP10-9P60411 292 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 HBBP68871 147 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 MRPL54Q6P161 138 aaKnown RBP16.77■□□□□ 0.28
CCM2-206ENST00000474617 Q6YL49 198 aa16.77■□□□□ 0.28
CCM2-206ENST00000474617 BMI1P35226 326 aa16.76■□□□□ 0.27
CCM2-206ENST00000474617 RPS20P60866 119 aaKnown RBP16.76■□□□□ 0.27
CCM2-206ENST00000474617 RAB4BP61018 213 aa16.76■□□□□ 0.27
CCM2-206ENST00000474617 PAFAH1B2P68402 229 aa16.76■□□□□ 0.27
CCM2-206ENST00000474617 SRSF2Q01130 221 aaKnown RBP16.76■□□□□ 0.27
CCM2-206ENST00000474617 SAMD13Q5VXD3 122 aa16.76■□□□□ 0.27
CCM2-206ENST00000474617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms