RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SCRT2Q9NQ03 307 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 PLGLAQ15195 96 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 VAMP3Q15836 100 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 NEU4Q8WWR8 484 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-207ENST00000473212 TNFRSF14Q92956 283 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 HSPB8Q9UJY1 196 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 TRBV19A0A075B6N1 114 aa16.67■□□□□ 0.26
COL18A1-207ENST00000473212 BVES-AS1Q5T3Y7 98 aa16.67■□□□□ 0.26
COL18A1-207ENST00000473212 OR4C5Q8NGB2 326 aa16.67■□□□□ 0.26
COL18A1-207ENST00000473212 TPPP3Q9BW30 176 aa16.67■□□□□ 0.26
COL18A1-207ENST00000473212 A0A1W2PRD5 423 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 A0A1W2PRF3 423 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 A0A1W2PRM7 423 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 RPEQ96AT9 228 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 RIGQ13278 110 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 BPIFA4PQ86YQ2 179 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 SCNM1Q9BWG6 230 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 IGF2RP11717 2491 aa16.66■□□□□ 0.26
COL18A1-207ENST00000473212 PPIAL4CA0A0B4J2A2 164 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 MUC21A0A0G2JKD1 596 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 MUC21A0A140T8X8 626 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 TAX1BP3O14907 124 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 PPIAL4GP0DN37 164 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 MUC21Q5SSG8 566 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 TMEM75Q8N9X5 138 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 SHANK2-AS3Q9BTD1 123 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 PSG8Q9UQ74 426 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 RBX1P62877 108 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 SIGLEC15Q6ZMC9 328 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 AP5S1Q9NUS5 200 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 HILPDAQ9Y5L2 63 aa16.65■□□□□ 0.26
COL18A1-207ENST00000473212 TRBV6-1A0A0K0K1D8 114 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 TIMM23O14925 209 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 CNIH1O95406 144 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 APOBEC3AP31941 199 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-207ENST00000473212 CRIP1P50238 77 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 K7EIM0 57 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 HLA-DRB1P01911 266 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 ONECUT1Q9UBC0 465 aa16.64■□□□□ 0.25
COL18A1-207ENST00000473212 H3BRN7 92 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 K7EP13 123 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 LINC01545Q5VT33 79 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 A0A087X0K7 114 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 M0R3E3 92 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 KLRD1Q13241 179 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 PSG3Q16557 428 aa16.63■□□□□ 0.25
COL18A1-207ENST00000473212 PRSS3P2Q8NHM4 247 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 MS4A6AQ9H2W1 248 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 FAM90A27PA6NNH2 459 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 K7EQM0 130 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 NCR2O95944 276 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 IL4P05112 153 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 C12orf54Q6X4T0 127 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 FA2HQ7L5A8 372 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 ZNF747Q9BV97 191 aa16.62■□□□□ 0.25
COL18A1-207ENST00000473212 AKAP6Q13023 2319 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 TRAV30A0A087WSZ9 112 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 OR2T8A6NH00 312 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 CBY3A6NI87 242 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 CD3EP07766 207 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 ARF6P62330 175 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 DEFB125Q8N687 156 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 ZNF491Q8N8L2 437 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 C8orf49Q96NF6 230 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 FAM106CPP0CH98 169 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 FCGR2BP31994 310 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-207ENST00000473212 FAM106AQ4KMX7 169 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 RNF125Q96EQ8 232 aa16.61■□□□□ 0.25
COL18A1-207ENST00000473212 SPTBN1Q01082 2364 aaKnown RBP16.61■□□□□ 0.25
COL18A1-207ENST00000473212 FOXE3Q13461 319 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 CDSNQ15517 529 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 COL6A6A6NMZ7 2263 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 B9A039 149 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 SNAI2O43623 268 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 GATD1Q8NB37 220 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 ZNF414Q96IQ9 312 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 RNF24Q9Y225 148 aa16.6■□□□□ 0.25
COL18A1-207ENST00000473212 IFI27P40305 119 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-207ENST00000473212 OR10AG1Q8NH19 301 aa16.59■□□□□ 0.25
COL18A1-207ENST00000473212 TMSB15BA0A087X1C1 80 aa16.59■□□□□ 0.25
COL18A1-207ENST00000473212 SERTM2A0A1B0GWG4 89 aa16.59■□□□□ 0.25
COL18A1-207ENST00000473212 LY6LH3BQJ8 138 aa16.59■□□□□ 0.25
COL18A1-207ENST00000473212 MRPS12O15235 138 aaKnown RBP16.59■□□□□ 0.25
COL18A1-207ENST00000473212 LOC389332A0A1B0GUA5 103 aa16.58■□□□□ 0.25
COL18A1-207ENST00000473212 CSN1S1P47710 185 aa16.58■□□□□ 0.25
COL18A1-207ENST00000473212 HIST1H1AQ02539 215 aaPredicted RBP16.58■□□□□ 0.25
COL18A1-207ENST00000473212 LOXL1Q08397 574 aaPredicted RBP16.58■□□□□ 0.25
COL18A1-207ENST00000473212 ZNF672Q499Z4 452 aaPredicted RBP16.58■□□□□ 0.25
COL18A1-207ENST00000473212 LYPD1Q8N2G4 141 aa16.58■□□□□ 0.25
COL18A1-207ENST00000473212 A0A1B0GW15 77 aa16.58■□□□□ 0.24
COL18A1-207ENST00000473212 IGHV3-23P01764 117 aa16.58■□□□□ 0.24
COL18A1-207ENST00000473212 RHOGP84095 191 aa16.58■□□□□ 0.24
COL18A1-207ENST00000473212 TMEM213A2RRL7 107 aa16.57■□□□□ 0.24
COL18A1-207ENST00000473212 D6R8Y8 96 aa16.57■□□□□ 0.24
COL18A1-207ENST00000473212 CT45A10P0DMU9 189 aa16.57■□□□□ 0.24
COL18A1-207ENST00000473212 COX8AP10176 69 aa16.57■□□□□ 0.24
COL18A1-207ENST00000473212 GPR183P32249 361 aa16.57■□□□□ 0.24
COL18A1-207ENST00000473212 AMMECR1LQ6DCA0 310 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 LYZL1Q6UWQ5 148 aa16.56■□□□□ 0.24
COL18A1-207ENST00000473212 OR8A1Q8NGG7 326 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms