RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 DISC1C4P0D8 188 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 PRAC2D3DTV9 90 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 H3BRN7 92 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 GAGE7O76087 117 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 SNRPCP09234 159 aaKnown RBP6.36□□□□□ -1.39
VCL-204ENST00000472585 GAGE12FP0CL80 117 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 GAGE12GP0CL81 117 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 GAGE12IP0CL82 117 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 DNAH10OSP0CZ25 163 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 ZNF182P17025 639 aaPredicted RBP6.36□□□□□ -1.39
VCL-204ENST00000472585 M6PRP20645 277 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 GCSHP23434 173 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 ATP5IP56385 69 aaPredicted RBP6.36□□□□□ -1.39
VCL-204ENST00000472585 PSG3Q16557 428 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 GGNBP1Q5YKI7 109 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 MZT2AQ6P582 158 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 PATE2Q6UY27 113 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 ZBTB8BQ8NAP8 495 aaPredicted RBP6.36□□□□□ -1.39
VCL-204ENST00000472585 ZNF738Q8NE65 137 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 SMIM4Q8WVI0 70 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 C16orf74Q96GX8 76 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 SHANK2-AS3Q9BTD1 123 aa6.36□□□□□ -1.39
VCL-204ENST00000472585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
VCL-204ENST00000472585 A0A096LPF7 62 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 FABP1P07148 127 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 AKAIN1P0CW23 69 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 AKR1C4P17516 323 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 RHOBP62745 196 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 HAMPP81172 84 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 SSBP1Q04837 148 aaKnown RBP6.35□□□□□ -1.39
VCL-204ENST00000472585 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 TMEM256Q8N2U0 113 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 OR1S1Q8NH92 325 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 TMEM263Q8WUH6 116 aaKnown RBP6.35□□□□□ -1.39
VCL-204ENST00000472585 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 CACFD1Q9UGQ2 172 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 KCNIP3Q9Y2W7 256 aa6.35□□□□□ -1.39
VCL-204ENST00000472585 ANKRD20A5PA0PJZ0 165 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
VCL-204ENST00000472585 CDKN1BP46527 198 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 GFI1BQ5VTD9 330 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 Q6ZTI0 123 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 CLVS1Q8IUQ0 354 aaPredicted RBP6.34□□□□□ -1.39
VCL-204ENST00000472585 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 RPUSD4Q96CM3 377 aaKnown RBP6.34□□□□□ -1.39
VCL-204ENST00000472585 GPR82Q96P67 336 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 TMPRSS5Q9H3S3 457 aa6.34□□□□□ -1.39
VCL-204ENST00000472585 PAIP2BQ9ULR5 123 aaKnown RBP6.34□□□□□ -1.39
VCL-204ENST00000472585 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.4
VCL-204ENST00000472585 A0A087X0K7 114 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 LINC00854A0A1B0GVQ3 168 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 H3BNG1 76 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 H7BYZ3 331 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 WRBO00258 174 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 CCNKO75909 580 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 CFDP00746 253 aaPredicted RBP6.33□□□□□ -1.4
VCL-204ENST00000472585 RAB11AP62491 216 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 NFE4Q86UQ8 179 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 BPIFCQ8NFQ6 507 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 DEFB104AQ8WTQ1 72 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 PRRT1Q99946 306 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 TMEM147Q9BVK8 224 aa6.33□□□□□ -1.4
VCL-204ENST00000472585 A0A087WTM6 91 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
VCL-204ENST00000472585 H3BP45 60 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 H3BTX0 84 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 SLC17A3O00476 420 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 CTDSPLO15194 276 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 SIVA1O15304 175 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 SYNGR2O43760 224 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 ADAP1O75689 374 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 CT45A10P0DMU9 189 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 PLP1P60201 277 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 SPCS2Q15005 226 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 MORN5Q5VZ52 161 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 CYP2G1PQ6ZSU1 146 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 ACOT7LQ6ZUV0 252 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 C15orf40Q8WUR7 153 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 SOSTQ9BQB4 213 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 TMEM70Q9BUB7 260 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 ZNF331Q9NQX6 463 aaPredicted RBP6.32□□□□□ -1.4
VCL-204ENST00000472585 HIGD1AQ9Y241 93 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 HMCN2Q8NDA2 5059 aa6.32□□□□□ -1.4
VCL-204ENST00000472585 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 J3KRW8 73 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 SMIM18P0DKX4 95 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
VCL-204ENST00000472585 MRPS10P82664 201 aaKnown RBP6.31□□□□□ -1.4
VCL-204ENST00000472585 DAZ2Q13117 558 aaKnown RBP6.31□□□□□ -1.4
VCL-204ENST00000472585 SPANXN5Q5MJ07 72 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 Q6ZQT7 251 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 TMED4Q7Z7H5 227 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 C11orf72Q8NBR9 251 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 ZNF431Q8TF32 576 aaPredicted RBP6.31□□□□□ -1.4
VCL-204ENST00000472585 AP3S1Q92572 193 aa6.31□□□□□ -1.4
VCL-204ENST00000472585 VCX3AQ9NNX9 186 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms