RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 NOTCH3Q9UM47 2321 aa12.67□□□□□ -0.38
CCM2-205ENST00000472223 ISLRO14498 428 aa12.66□□□□□ -0.38
CCM2-205ENST00000472223 PDE6HQ13956 83 aa12.66□□□□□ -0.38
CCM2-205ENST00000472223 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
CCM2-205ENST00000472223 UBQLN2Q9UHD9 624 aa12.66□□□□□ -0.38
CCM2-205ENST00000472223 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
CCM2-205ENST00000472223 K7EQG2 157 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 IGLC2P0DOY2 106 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 GCHFRP30047 84 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 PSMB3P49720 205 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 FHITP49789 147 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 PPT1P50897 306 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 MBD3L1Q8WWY6 194 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 SAT2Q96F10 170 aaPredicted RBP12.65□□□□□ -0.38
CCM2-205ENST00000472223 LINC00052Q96N35 136 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 PKD1L1Q8TDX9 2849 aa12.65□□□□□ -0.38
CCM2-205ENST00000472223 SORL1Q92673 2214 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
CCM2-205ENST00000472223 ZNF253O75346 499 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 EIF3GO75821 320 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCM2-205ENST00000472223 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
CCM2-205ENST00000472223 FGF8P55075 233 aaPredicted RBP12.64□□□□□ -0.39
CCM2-205ENST00000472223 CD81P60033 236 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 RAB14P61106 215 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 ZNF726P1Q15940 193 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 ZNF680Q8NEM1 530 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 FXYD5Q96DB9 178 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
CCM2-205ENST00000472223 OR11H12B2RN74 326 aa12.63□□□□□ -0.39
CCM2-205ENST00000472223 H3BQ15 152 aa12.63□□□□□ -0.39
CCM2-205ENST00000472223 LYPD1Q8N2G4 141 aa12.63□□□□□ -0.39
CCM2-205ENST00000472223 A0A1B0GV50 99 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 H3BTX0 84 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 CSN1S1P47710 185 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
CCM2-205ENST00000472223 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
CCM2-205ENST00000472223 IFNA1P01562 189 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 ZNF767PQ75MW2 155 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 CMTM2Q8TAZ6 248 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
CCM2-205ENST00000472223 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
CCM2-205ENST00000472223 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
CCM2-205ENST00000472223 TRAV1-1A0A0B4J248 108 aa12.6□□□□□ -0.39
CCM2-205ENST00000472223 DEFB131AP59861 70 aa12.6□□□□□ -0.39
CCM2-205ENST00000472223 PSG3Q16557 428 aa12.6□□□□□ -0.39
CCM2-205ENST00000472223 ZNF738Q8NE65 137 aa12.6□□□□□ -0.39
CCM2-205ENST00000472223 PRR25Q96S07 402 aa12.6□□□□□ -0.39
CCM2-205ENST00000472223 SOCS3O14543 225 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 CD7P09564 240 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 KRTAP10-11P60412 298 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 ICAM4Q14773 271 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 RXFP4Q8TDU9 374 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 Q9H3A6 140 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 TMPRSS5Q9H3S3 457 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 OTORQ9NRC9 128 aa12.59□□□□□ -0.39
CCM2-205ENST00000472223 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 PGPA6NDG6 321 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 SLC17A3O00476 420 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 KPRPQ5T749 579 aaPredicted RBP12.58□□□□□ -0.4
CCM2-205ENST00000472223 SUN5Q8TC36 379 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
CCM2-205ENST00000472223 TUBA4BQ9H853 241 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 MANBALQ9NQG1 85 aa12.58□□□□□ -0.4
CCM2-205ENST00000472223 NDUFB4O95168 129 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 TAGLN2P37802 199 aaKnown RBP12.57□□□□□ -0.4
CCM2-205ENST00000472223 UBE2G2P60604 165 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 CST9LP1Q5W188 147 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 RNF182Q8N6D2 247 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 ARL2-SNX15V9GYD0 113 aa12.57□□□□□ -0.4
CCM2-205ENST00000472223 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 K7EQM0 130 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 STHQ8IWL8 128 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 FAM24BQ8N5W8 94 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 RPUSD4Q96CM3 377 aaKnown RBP12.56□□□□□ -0.4
CCM2-205ENST00000472223 CMYA5Q8N3K9 4069 aa12.56□□□□□ -0.4
CCM2-205ENST00000472223 F6UZH7 168 aa12.55□□□□□ -0.4
CCM2-205ENST00000472223 DUSP14O95147 198 aaKnown RBP12.55□□□□□ -0.4
CCM2-205ENST00000472223 SLC25A5P05141 298 aaKnown RBP12.55□□□□□ -0.4
CCM2-205ENST00000472223 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
CCM2-205ENST00000472223 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms