RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 A0A1W2PPV4 95 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 MBP02144 154 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 OR10J4P0C629 311 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 FXYD5Q96DB9 178 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 SAT2Q96F10 170 aaPredicted RBP10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 PAXXQ9BUH6 204 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 OR51M1Q9H341 326 aa10.88□□□□□ -0.67
SMARCD3-207ENST00000472103 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 OR7C2O60412 319 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 NDUFB4O95168 129 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 GTSCR1Q86UQ5 136 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 HRH4Q9H3N8 390 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 RNF24Q9Y225 148 aa10.87□□□□□ -0.67
SMARCD3-207ENST00000472103 AGRNO00468 2067 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 KHDC3LQ587J8 217 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 FAM74A1Q5RGS3 127 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 RNF182Q8N6D2 247 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 BLNKQ8WV28 456 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 C16orf92Q96LL3 132 aa10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 ZNF331Q9NQX6 463 aaPredicted RBP10.86□□□□□ -0.67
SMARCD3-207ENST00000472103 NBEAL1Q6ZS30 2694 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 KNCNA6PVL3 124 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 ARL14EPLP0DKL9 152 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 IGHV4-30-4P0DP06 118 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 C4BPBP20851 252 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 PSMB3P49720 205 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 MEOX2P50222 304 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 FGF8P55075 233 aaPredicted RBP10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 TAS2R45P59539 299 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 PHYHIPLQ96FC7 376 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 LINC00052Q96N35 136 aa10.85□□□□□ -0.67
SMARCD3-207ENST00000472103 F6UB75 175 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 ISLRO14498 428 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 SULT1A2P50226 295 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 FAM110AQ9BQ89 295 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 TMPRSS5Q9H3S3 457 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 SRD5A3Q9H8P0 318 aa10.84□□□□□ -0.67
SMARCD3-207ENST00000472103 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 UMAD1C9J7I0 102 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 GCHFRP30047 84 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 ID1P41134 155 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 PQLC2Q6ZP29 291 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 EXOC3-AS1Q8N2X6 119 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
SMARCD3-207ENST00000472103 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 ZNF705FA8MVS1 300 aaPredicted RBP10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 ZNF253O75346 499 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 SNRPD3P62318 126 aaKnown RBP10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 PSG3Q16557 428 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 GUK1Q16774 197 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 LINC00322Q6ZN03 302 aaPredicted RBP10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 SUN5Q8TC36 379 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 LRRC20Q8TCA0 184 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
SMARCD3-207ENST00000472103 A0A1B0GV50 99 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 A8MZ25 164 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 PRAC2D3DTV9 90 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 M0R3E3 92 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 CXorf1O96002 111 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 FRMD6-AS1P0C7T7 363 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 ZNF705DP0CH99 300 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 ZNF705BP0CI00 300 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 CMC4P56277 68 aaPredicted RBP10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
SMARCD3-207ENST00000472103 RPL35AP18077 110 aaKnown RBP10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 RANP62826 216 aaKnown RBP10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 PDE6HQ13956 83 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 ICAM4Q14773 271 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 ACTL10Q5JWF8 245 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 EIF5AL1Q6IS14 154 aaKnown RBP10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 DPPA3Q6W0C5 159 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 IQCF2Q8IXL9 164 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 ZNF738Q8NE65 137 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 Q9H3A6 140 aa10.8□□□□□ -0.68
SMARCD3-207ENST00000472103 CCL20P78556 96 aa10.79□□□□□ -0.68
SMARCD3-207ENST00000472103 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
SMARCD3-207ENST00000472103 SFT2D1Q8WV19 159 aa10.79□□□□□ -0.68
SMARCD3-207ENST00000472103 SAV1Q9H4B6 383 aaPredicted RBP10.79□□□□□ -0.68
SMARCD3-207ENST00000472103 TUBA4BQ9H853 241 aa10.79□□□□□ -0.68
SMARCD3-207ENST00000472103 A0A0J9YX75 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms