RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 AKR1C1Q04828 323 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 FGL1Q08830 312 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 IL18Q14116 193 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 LYZL2Q7Z4W2 148 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 TMEM144Q7Z5S9 345 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 BAP18Q8IXM2 172 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 ZNF503Q96F45 646 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 MCUBQ9NWR8 336 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 PTTG2Q9NZH5 202 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
CPSF4-211ENST00000471455 TIMM8BQ9Y5J9 83 aaPredicted RBP6.38□□□□□ -1.39
CPSF4-211ENST00000471455 CRXO43186 299 aaPredicted RBP6.37□□□□□ -1.39
CPSF4-211ENST00000471455 SLC25A6P12236 298 aa6.37□□□□□ -1.39
CPSF4-211ENST00000471455 M6PRP20645 277 aa6.37□□□□□ -1.39
CPSF4-211ENST00000471455 FAUP35544 74 aaKnown RBP6.37□□□□□ -1.39
CPSF4-211ENST00000471455 HIST1H1AQ02539 215 aaPredicted RBP6.37□□□□□ -1.39
CPSF4-211ENST00000471455 LRRC20Q8TCA0 184 aa6.37□□□□□ -1.39
CPSF4-211ENST00000471455 TMEM263Q8WUH6 116 aaKnown RBP6.37□□□□□ -1.39
CPSF4-211ENST00000471455 GNPNAT1Q96EK6 184 aaPredicted RBP6.37□□□□□ -1.39
CPSF4-211ENST00000471455 Q9H8V8 135 aa6.37□□□□□ -1.39
CPSF4-211ENST00000471455 DMBT1Q9UGM3 2413 aaPredicted RBP6.36□□□□□ -1.39
CPSF4-211ENST00000471455 TRAV12-2A0A075B6T6 113 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 IGKV1OR2-108A0A075B7D4 117 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 ANKRD20A5PA0PJZ0 165 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 H7BYZ3 331 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 IAPPP10997 89 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 CDKN1BP46527 198 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 CTF1Q16619 201 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 CCDC28AQ8IWP9 274 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 OR8A1Q8NGG7 326 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 DIRAS2Q96HU8 199 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 Q9H3A6 140 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 RSL24D1Q9UHA3 163 aaKnown RBP6.36□□□□□ -1.39
CPSF4-211ENST00000471455 HIGD1AQ9Y241 93 aa6.36□□□□□ -1.39
CPSF4-211ENST00000471455 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 PLAC8L1A1L4L8 177 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 H3BNG1 76 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 H3BRN7 92 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 SYNGR2O43760 224 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 PITX3O75364 302 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 HYPMO75409 117 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 RLN2P04090 185 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 IL5P05113 134 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 HTN1P15515 57 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 CXCL2P19875 107 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 SELENOTP62341 195 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 OR5I1Q13606 314 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 RNF182Q8N6D2 247 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 RXFP4Q8TDU9 374 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 SHANK2-AS3Q9BTD1 123 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 SLC25A39Q9BZJ4 359 aaPredicted RBP6.35□□□□□ -1.39
CPSF4-211ENST00000471455 MIXL1Q9H2W2 232 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 STRAPQ9Y3F4 350 aaKnown RBP6.35□□□□□ -1.39
CPSF4-211ENST00000471455 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
CPSF4-211ENST00000471455 TRAV26-1A0A087WT03 109 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 A0A087X0K7 114 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 SMCO3A2RU48 225 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 EPM2AB3EWF7 344 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 CXCL3P19876 107 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 AZU1P20160 251 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 AP3S2P59780 193 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 FCN2Q15485 313 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 PSG3Q16557 428 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 TMEM128Q5BJH2 165 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 CYP2G1PQ6ZSU1 146 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 ACOT7LQ6ZUV0 252 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 TMED4Q7Z7H5 227 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 LRTM2Q8N967 370 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
CPSF4-211ENST00000471455 SLC50A1Q9BRV3 221 aa6.34□□□□□ -1.39
CPSF4-211ENST00000471455 NOP10Q9NPE3 64 aaKnown RBP6.34□□□□□ -1.39
CPSF4-211ENST00000471455 MRPS16Q9Y3D3 137 aaKnown RBP6.34□□□□□ -1.39
CPSF4-211ENST00000471455 PRSS46E5RG02 174 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 WRBO00258 174 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 CTDSP2O14595 271 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 PRM2P04554 102 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 OR5G3P0C626 314 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 LINC00869P0C866 280 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 GATA2P23769 480 aaPredicted RBP6.33□□□□□ -1.4
CPSF4-211ENST00000471455 SPANXN5Q5MJ07 72 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 LCN15Q6UWW0 184 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 RPUSD4Q96CM3 377 aaKnown RBP6.33□□□□□ -1.4
CPSF4-211ENST00000471455 C17orf77Q96MU5 243 aa6.33□□□□□ -1.4
CPSF4-211ENST00000471455 NAA50Q9GZZ1 169 aaKnown RBP6.33□□□□□ -1.4
CPSF4-211ENST00000471455 CCDC59Q9P031 241 aaKnown RBP6.33□□□□□ -1.4
CPSF4-211ENST00000471455 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
CPSF4-211ENST00000471455 A0A0J9YY99 117 aa6.32□□□□□ -1.4
CPSF4-211ENST00000471455 ZNF701M0R085 212 aaPredicted RBP6.32□□□□□ -1.4
CPSF4-211ENST00000471455 ANXA7P20073 488 aaKnown RBP6.32□□□□□ -1.4
CPSF4-211ENST00000471455 PLP1P60201 277 aa6.32□□□□□ -1.4
CPSF4-211ENST00000471455 PXDC1Q5TGL8 231 aa6.32□□□□□ -1.4
CPSF4-211ENST00000471455 CCDC190Q86UF4 302 aa6.32□□□□□ -1.4
CPSF4-211ENST00000471455 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
CPSF4-211ENST00000471455 DEDD2Q8WXF8 326 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms