RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 ZFAND6Q6FIF0 208 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 ACTR3CQ9C0K3 210 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-211ENST00000471260 TMPRSS5Q9H3S3 457 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 RETNQ9HD89 108 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 NAT8Q9UHE5 227 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 SMPXQ9UHP9 88 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
HMGN1-211ENST00000471260 TRBV24-1A0A075B6N3 115 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 BMI1P35226 326 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 PSMB3P49720 205 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 APOC4P55056 127 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 RAB11AP62491 216 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
HMGN1-211ENST00000471260 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 IGHV7-4-1A0A0J9YVY3 117 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 LCE6AA0A183 80 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 ZFP92A6NM28 416 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 CHEK1O14757 476 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 YIF1AO95070 293 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 SPCS3P61009 180 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 B2MP61769 119 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 IZUMO4Q1ZYL8 232 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 ACOT6Q3I5F7 207 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-211ENST00000471260 Q6ZWC4 215 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 TMEM116Q8NCL8 245 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 Q8WTZ3 238 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 ENY2Q9NPA8 101 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 TP53TG1Q9Y2A0 90 aa10.04□□□□□ -0.8
HMGN1-211ENST00000471260 STARD9Q9P2P6 4700 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 FNDC10F2Z333 226 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
HMGN1-211ENST00000471260 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 FGF7P21781 194 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 RPS10P46783 165 aaKnown RBP10.03□□□□□ -0.8
HMGN1-211ENST00000471260 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 WFDC3Q8IUB2 231 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 RNF2Q99496 336 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 LYSTQ99698 3801 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 OVOL2Q9BRP0 275 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 RFNGQ9Y644 331 aa10.03□□□□□ -0.8
HMGN1-211ENST00000471260 IGHV3OR16-8A0A075B7F1 116 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 CEBPZOSA8MTT3 80 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 RNASE2P10153 161 aaKnown RBP10.02□□□□□ -0.81
HMGN1-211ENST00000471260 HOXA5P20719 270 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 PAFAH1B2P68402 229 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 ODF3L2Q3SX64 289 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 OR8G2PQ6IF36 304 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.81
HMGN1-211ENST00000471260 F6UZH7 168 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 PDE6DO43924 150 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 S100PP25815 95 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 CEBPGP53567 150 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-211ENST00000471260 ZNF674Q2M3X9 581 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 FFAR4Q5NUL3 377 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 TOMM20LQ6UXN7 152 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 RPP25LQ8N5L8 163 aaKnown RBP10.01□□□□□ -0.81
HMGN1-211ENST00000471260 OR10G9Q8NGN4 311 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 OR10G7Q8NGN6 311 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 OR4X1Q8NH49 305 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 SMIM7Q9BQ49 75 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 OR51M1Q9H341 326 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 VSIRQ9H7M9 311 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 ARL2-SNX15V9GYD0 113 aa10.01□□□□□ -0.81
HMGN1-211ENST00000471260 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
HMGN1-211ENST00000471260 TENM2Q9NT68 2774 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 CLN5O75503 358 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 IGHV3-48P01763 117 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 OPRK1P41145 380 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
HMGN1-211ENST00000471260 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 SSX7Q7RTT5 188 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 STPG3Q8N7X2 389 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 FAM210BQ96KR6 192 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 PYGO2Q9BRQ0 406 aa10□□□□□ -0.81
HMGN1-211ENST00000471260 TRAV2A0A0B4J234 112 aa9.99□□□□□ -0.81
HMGN1-211ENST00000471260 SPRY2O43597 315 aa9.99□□□□□ -0.81
HMGN1-211ENST00000471260 S100A2P29034 98 aa9.99□□□□□ -0.81
HMGN1-211ENST00000471260 ZFAND3Q9H8U3 227 aa9.99□□□□□ -0.81
HMGN1-211ENST00000471260 SLC25A22Q9H936 323 aa9.99□□□□□ -0.81
HMGN1-211ENST00000471260 MAP6D1Q9H9H5 199 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms