RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 XAF1Q6GPH4 301 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 LYG2Q86SG7 212 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 Q8N402 240 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 OR4K15Q8NH41 348 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 DYNC2LI1Q8TCX1 351 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 TNFAIP8L1Q8WVP5 186 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 FAM103A1Q9BTL3 118 aaKnown RBP3.45□□□□□ -1.86
CKS1B-204ENST00000471245 NXF2Q9GZY0 626 aaKnown RBP3.45□□□□□ -1.86
CKS1B-204ENST00000471245 VCXQ9H320 206 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 FBXL15Q9H469 300 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 TAS2R4Q9NYW5 299 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 ANXA10Q9UJ72 324 aa3.45□□□□□ -1.86
CKS1B-204ENST00000471245 FAT1Q14517 4588 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 G3V2T6 193 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 SOCS1O15524 211 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 ORC5O43913 435 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 LIMS3P0CW19 117 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 LIMS4P0CW20 117 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 AZU1P20160 251 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 PPP1CCP36873 323 aaKnown RBP3.44□□□□□ -1.86
CKS1B-204ENST00000471245 TPPP2P59282 170 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 TAS2R31P59538 309 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
CKS1B-204ENST00000471245 RSU1Q15404 277 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 MORN2Q502X0 79 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 CD200R1LQ6Q8B3 271 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 FAM131AQ6UXB0 335 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF833PQ6ZTB9 187 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 LGI3Q8N145 548 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 OR5D14Q8NGL3 314 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 OR52N1Q8NH53 320 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 YIPF6Q96EC8 236 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 DCUN1D5Q9BTE7 237 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 C12orf4Q9NQ89 552 aa3.44□□□□□ -1.86
CKS1B-204ENST00000471245 DAPL1A0PJW8 107 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 AIPO00170 330 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 RTL8CO15255 209 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 FABP7O15540 132 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 MED6O75586 246 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 FAM107AO95990 144 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 OCM2P0CE71 109 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 PET100P0DJ07 73 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 SAA2P0DJI9 122 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 IL3RAP26951 378 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 TALDO1P37837 337 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 TAS2R46P59540 309 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 RPS11P62280 158 aaKnown RBP eCLIP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 SNRPGP62308 76 aaKnown RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 BAXQ07812 192 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 MPV17LQ2QL34 196 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 TTC32Q5I0X7 151 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 Q5W150 140 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF660Q6AZW8 331 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 THOC7Q6I9Y2 204 aaKnown RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 SLC16A13Q7RTY0 426 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 ACBD7Q8N6N7 88 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 TCTEX1D1Q8N7M0 179 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 OR2K2Q8NGT1 345 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 OR5AK2Q8NH90 309 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 MRPL30Q8TCC3 161 aaKnown RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 NARS2Q96I59 477 aaKnown RBP3.43□□□□□ -1.86
CKS1B-204ENST00000471245 GPER1Q99527 375 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 GGTLC1Q9BX51 225 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 CST11Q9H112 138 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 TAF9BQ9HBM6 251 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF355PQ9NSJ1 428 aa3.43□□□□□ -1.86
CKS1B-204ENST00000471245 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 SMIM26A0A096LP01 95 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 LOC102724200A0A096LPH7 203 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TMEM212A6NML5 194 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF705GA8MUZ8 300 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 KRBOX1C9JBD0 128 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 H0YJW9 148 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 MYL12BO14950 172 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TCAPO15273 167 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 APCSP02743 223 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TRGV3P03979 118 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF93P35789 620 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 MRPS15P82914 257 aaKnown RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 RBMY1FQ15415 496 aaKnown RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 AKIRIN2Q53H80 203 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ACTBL2Q562R1 376 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 UNQ5815/PRO19632Q6UWF5 114 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 OR5T1Q8NG75 326 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 OR1S1Q8NH92 325 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 NEK7Q8TDX7 302 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ABHD14BQ96IU4 210 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 KCNS1Q96KK3 526 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 FAM210AQ96ND0 272 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 METTL9Q9H1A3 318 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 BANF2Q9H503 90 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ZNF430Q9H8G1 570 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-204ENST00000471245 PLEKHJ1Q9NW61 149 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TRAPPC2LQ9UL33 140 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 APLNQ9ULZ1 77 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 ERGIC3Q9Y282 383 aa3.42□□□□□ -1.86
CKS1B-204ENST00000471245 TP53TG1Q9Y2A0 90 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms