RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 PRM2P04554 102 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 RPL7P18124 248 aaKnown RBP6.1□□□□□ -1.43
XRN1-208ENST00000470537 CDKN1BP46527 198 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 XGP55808 180 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 LINC00315P59091 139 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 SSBP1Q04837 148 aaKnown RBP6.1□□□□□ -1.43
XRN1-208ENST00000470537 FGL1Q08830 312 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 OR2F1Q13607 317 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 SMCO1Q147U7 214 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 BAP18Q8IXM2 172 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 TMEM229BQ8NBD8 167 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 TMEM170AQ8WVE7 144 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 AP3S1Q92572 193 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 UHRF2Q96PU4 802 aa6.1□□□□□ -1.43
XRN1-208ENST00000470537 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 IGKV1D-37A0A075B6S9 117 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 TRAV12-2A0A075B6T6 113 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 A0A0B4J2A0 478 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 A0A0J9YY99 117 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 DISC1C4P0D8 188 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 MED6O75586 246 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 ANXA3P12429 323 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 ELK1P19419 428 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 ORM2P19652 201 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 RAP2BP61225 183 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 SRPXP78539 464 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 HIST1H1AQ02539 215 aaPredicted RBP6.09□□□□□ -1.43
XRN1-208ENST00000470537 Q6ZSN1 163 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 OR8A1Q8NGG7 326 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 OR1S1Q8NH92 325 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 RNASE8Q8TDE3 154 aaKnown RBP6.09□□□□□ -1.43
XRN1-208ENST00000470537 C17orf77Q96MU5 243 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 CIB3Q96Q77 187 aaPredicted RBP6.09□□□□□ -1.43
XRN1-208ENST00000470537 KRTAP1-5Q9BYS1 174 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 SLC25A39Q9BZJ4 359 aaPredicted RBP6.09□□□□□ -1.43
XRN1-208ENST00000470537 SLC25A32Q9H2D1 315 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 SHPKQ9UHJ6 478 aa6.09□□□□□ -1.43
XRN1-208ENST00000470537 CRYM-AS1A6NIL9 109 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 ANKRD65E5RJM6 399 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 HPGDSO60760 199 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 LSM3P62310 102 aaKnown RBP6.08□□□□□ -1.44
XRN1-208ENST00000470537 MRPS10P82664 201 aaKnown RBP6.08□□□□□ -1.44
XRN1-208ENST00000470537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 THAP8Q8NA92 274 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 ZBTB8BQ8NAP8 495 aaPredicted RBP6.08□□□□□ -1.44
XRN1-208ENST00000470537 OR52I2Q8NH67 350 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 LHFPL5Q8TAF8 219 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 PRRT1Q99946 306 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 RTBDNQ9BSG5 229 aaPredicted RBP6.08□□□□□ -1.44
XRN1-208ENST00000470537 RBKSQ9H477 322 aa6.08□□□□□ -1.44
XRN1-208ENST00000470537 PAIP2BQ9ULR5 123 aaKnown RBP6.08□□□□□ -1.44
XRN1-208ENST00000470537 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GAGE7O76087 117 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GCSHP23434 173 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 SLAQ13239 276 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 FHL2Q14192 279 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 PSG3Q16557 428 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 LINC00612Q8N6U2 182 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 GPR132Q9UNW8 380 aa6.07□□□□□ -1.44
XRN1-208ENST00000470537 TRGV2A0A075B6R0 118 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 HYPMO75409 117 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 IL5P05113 134 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 CXCL3P19876 107 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 ANXA7P20073 488 aaKnown RBP6.06□□□□□ -1.44
XRN1-208ENST00000470537 TGFBR1P36897 503 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 SELENOTP62341 195 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
XRN1-208ENST00000470537 DAZ2Q13117 558 aaKnown RBP6.06□□□□□ -1.44
XRN1-208ENST00000470537 Q6ZRN7 208 aaPredicted RBP6.06□□□□□ -1.44
XRN1-208ENST00000470537 CCDC190Q86UF4 302 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 RNF182Q8N6D2 247 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 OR4D10Q8NGI6 311 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 EXTL2Q9UBQ6 330 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 SCP2D1Q9UJQ7 156 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 HIGD1AQ9Y241 93 aa6.06□□□□□ -1.44
XRN1-208ENST00000470537 IGKV1OR2-108A0A075B7D4 117 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 A0A087WTM6 91 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 A0A087WXM4 84 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 A0A096LPF7 62 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 TRAV8-2A0A0B4J237 113 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
XRN1-208ENST00000470537 AKAIN1P0CW23 69 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 CXCL2P19875 107 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 AKR1C1Q04828 323 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 IGFL4Q6B9Z1 124 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 TEPPQ6URK8 271 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 OR51S1Q8NGJ8 323 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 RPUSD4Q96CM3 377 aaKnown RBP6.05□□□□□ -1.44
XRN1-208ENST00000470537 YIPF6Q96EC8 236 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 SLC50A1Q9BRV3 221 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 SHANK2-AS3Q9BTD1 123 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
XRN1-208ENST00000470537 RABL2AQ9UBK7 228 aaPredicted RBP6.05□□□□□ -1.44
XRN1-208ENST00000470537 RABL2BQ9UNT1 228 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms