RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 RAB2AP61019 212 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 EIF5AP63241 154 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 LGALSLQ3ZCW2 172 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 STOML3Q8TAV4 291 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 PDE6HQ13956 83 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 C9orf62Q8N4C0 152 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 OR10G4Q8NGN3 311 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 OR10G9Q8NGN4 311 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 OR10G7Q8NGN6 311 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-203ENST00000470278 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 H3BQ15 152 aa11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 HIST1H1EP10412 219 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF124Q15973 351 aa11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 SAT2Q96F10 170 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF331Q9NQX6 463 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
CDC42SE1-203ENST00000470278 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 LOC102724200A0A096LPH7 203 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 A0A1W2PPV4 95 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 SEC11BP0C7V7 166 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 PYYP10082 97 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 CDC34P49427 236 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 PQLC2Q6ZP29 291 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 PAXXQ9BUH6 204 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 RPRMQ9NS64 109 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
CDC42SE1-203ENST00000470278 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 SLC17A3O00476 420 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 OR7C2O60412 319 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 HLA-DRB4P13762 266 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 C4BPBP20851 252 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 FXYD5Q96DB9 178 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 ZNF503Q96F45 646 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 LINC00052Q96N35 136 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 SAV1Q9H4B6 383 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 HLA-DRB4X5D2U9 266 aa11.02□□□□□ -0.65
CDC42SE1-203ENST00000470278 UMAD1C9J7I0 102 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 STAG3L2P0CL84 134 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 STAG3L3P0CL85 134 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 APOC4P55056 127 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 TRPT1Q86TN4 253 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 SLC51BQ86UW2 128 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 STHQ8IWL8 128 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 RAB24Q969Q5 203 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 LYSTQ99698 3801 aa11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-203ENST00000470278 NDUFB4O95168 129 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 OR10J4P0C629 311 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 PSG9Q00887 426 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 PSG3Q16557 428 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 HAGHQ16775 308 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 ACTL10Q5JWF8 245 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 SBSPONQ8IVN8 264 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 RNF141Q8WVD5 230 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
CDC42SE1-203ENST00000470278 WWC2-AS2Q96NR7 200 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 CLUHP3Q96NS8 147 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
CDC42SE1-203ENST00000470278 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 A0A0J9YX75 114 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 CTXND1A0A1B0GTU2 59 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 H3BMM0 161 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 H3BTX0 84 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 DPPA3Q6W0C5 159 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
CDC42SE1-203ENST00000470278 A8MTW9 85 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 UBE2CO00762 179 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms