RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 PDLIM4P50479 330 aa5.66□□□□□ -1.5
GAPVD1-215ENST00000470056 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
GAPVD1-215ENST00000470056 PLAUP00749 431 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 LEPP41159 167 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 REG1BP48304 166 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 LINC01545Q5VT33 79 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 KIR3DL3Q8N743 410 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 SHANK1Q9Y566 2161 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 PRUNE2Q8WUY3 3088 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 C8orf46Q8TAG6 207 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 C15orf62A8K5M9 175 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 KIR3DS1Q14943 382 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 CD300EQ496F6 205 aaPredicted RBP5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 CTSZQ9UBR2 303 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 C9orf118A6NHY6 69 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 IGFBP2P18065 325 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 COL8A2P25067 703 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 DPM3Q9P2X0 92 aa5.65□□□□□ -1.5
GAPVD1-215ENST00000470056 RBMY1BA6NDE4 496 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 RBMY1EA6NEQ0 496 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 RBMY1DP0C7P1 496 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 RBMY1A1P0DJD3 496 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 RBMY1CP0DJD4 496 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 RIPPLY3P57055 190 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 SNRPD3P62318 126 aaKnown RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 PRSS8Q16651 343 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 UNQ5815/PRO19632Q6UWF5 114 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 ZNF562Q6V9R5 426 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 C1orf122Q6ZSJ8 110 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 ATP6V0BQ99437 205 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 ROS1P08922 2347 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 INS-IGF2F8WCM5 200 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 TNFRSF13BO14836 293 aaPredicted RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 FAM106AQ4KMX7 169 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 TMEM170BQ5T4T1 132 aa5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 WIPF2Q8TF74 440 aaPredicted RBP5.65□□□□□ -1.51
GAPVD1-215ENST00000470056 GNLYP22749 145 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 NPPCP23582 126 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 BRWD1-AS2P59051 145 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 LAGE3Q14657 143 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 EEF1AKMT3Q96AZ1 226 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 SRSF8Q9BRL6 282 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 ODF3L1Q8IXM7 274 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 PYGO2Q9BRQ0 406 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 GTF3C1Q12789 2109 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 ZNF292O60281 2723 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 FOXH1O75593 365 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 FAM159AQ6UWV7 190 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 TRGV9Q99603 122 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 GGTLC1Q9BX51 225 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 KLF12Q9Y4X4 402 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 HAPLN4Q86UW8 402 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 SPSB3Q6PJ21 355 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 RNASE7Q9H1E1 156 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 H7C2G1 150 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 FCGR2BP31994 310 aaPredicted RBP5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 TFPI2P48307 235 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 MIR17HGQ75NE6 70 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 NOTCH3Q9UM47 2321 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 IGHV2-70DA0A0C4DH43 119 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 A6NNC1 897 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 K7EMI3 77 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 GRNP28799 593 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 ERG28Q9UKR5 140 aa5.64□□□□□ -1.51
GAPVD1-215ENST00000470056 K7EP13 123 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 MOSP00540 346 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 SPINK8P0C7L1 97 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 ZNF295-AS1Q8N0V1 137 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 BUB1B-PAK6H3BSN5 160 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 PROP1O75360 226 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 MINOS1Q5TGZ0 78 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 PIMREGQ9BSJ6 248 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 MINOS1-NBL1R4GNA1 71 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 PSMB11A5LHX3 300 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 LGALS1P09382 135 aaKnown RBP5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 RAX2Q96IS3 184 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 MEIG1Q5JSS6 88 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 TMEM256Q8N2U0 113 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 OR11H6Q8NGC7 330 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 C21orf62Q9NYP8 219 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 TRAV3A0A0B4J244 114 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 ZNF815PA8K554 130 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 PRTN3P24158 256 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 CEP295Q9C0D2 2601 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 IGHV1-3A0A0C4DH29 117 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 TOMM40O96008 361 aa5.63□□□□□ -1.51
GAPVD1-215ENST00000470056 PMS2P5A8MQ11 134 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 ITLN2Q8WWU7 325 aaPredicted RBP5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 LYNX1G3V0Z9 82 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 IGKV1-16P04430 117 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 LYNX1P0DP58 116 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 COX8AP10176 69 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 NDUFA4L2Q9NRX3 87 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 MUC21A0A0G2JKD1 596 aa5.62□□□□□ -1.51
GAPVD1-215ENST00000470056 MUC21A0A140T8X8 626 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms