RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 H3BRM9 83 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 C17orf58Q2M2W7 97 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 GPR82Q96P67 336 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 SIGMAR1Q99720 223 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 PROCRQ9UNN8 238 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 TSSC4Q9Y5U2 329 aaPredicted RBP6.37□□□□□ -1.39
TPM3-215ENST00000469717 IGKV1D-37A0A075B6S9 117 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.37□□□□□ -1.39
TPM3-215ENST00000469717 COL8A1P27658 744 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 ZNF788Q6ZQV5 615 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 PDPNQ86YL7 162 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 PRSS22Q9GZN4 317 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 CXXC4Q9H2H0 198 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 A0A1W2PRD5 423 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 A0A1W2PRF3 423 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 A0A1W2PRM7 423 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 hADV38S2A0JD32 116 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 OVOL3O00110 214 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 UPK2O00526 184 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 FXYD2P54710 66 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 RBPMS2Q6ZRY4 209 aaKnown RBP6.37□□□□□ -1.39
TPM3-215ENST00000469717 PRSS3P2Q8NHM4 247 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 VSTM2AQ8TAG5 236 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 HSPB8Q9UJY1 196 aa6.37□□□□□ -1.39
TPM3-215ENST00000469717 C19orf71A6NCJ1 209 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 ZNF785A8K8V0 405 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 CNIH1O95406 144 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 LTAP01374 205 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 MYCNOSP40205 109 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 WT1-ASQ06250 92 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 ADAMTSL5Q6ZMM2 481 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 SH2D6Q7Z4S9 175 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 EXOC3-AS1Q8N2X6 119 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 NGBQ9NPG2 151 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 CT45A6P0DMU7 189 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 CT45A5P0DMU8 189 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 CT45A7P0DMV0 189 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 GCSHP23434 173 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 PRNTQ86SH4 94 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 DAZAP1Q96EP5 407 aaKnown RBP6.36□□□□□ -1.39
TPM3-215ENST00000469717 ADTRPQ96IZ2 230 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 A6NDN8 102 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 CCL21O00585 134 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 BRI3O95415 125 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 INSL3P51460 131 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 WFDC2Q14508 124 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 HCP5Q6MZN7 132 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
TPM3-215ENST00000469717 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
TPM3-215ENST00000469717 IGKV2D-26A0A0A0MRZ7 120 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.35□□□□□ -1.39
TPM3-215ENST00000469717 SMKR1H3BMG3 65 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 C2orf83Q53S99 150 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 PLA2G2CQ5R387 149 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
TPM3-215ENST00000469717 SRSF12Q8WXF0 261 aaKnown RBP6.35□□□□□ -1.39
TPM3-215ENST00000469717 NDFIP1Q9BT67 221 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 RAB1BQ9H0U4 201 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 TPSG1Q9NRR2 321 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 SPRR3Q9UBC9 169 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 OR11H12B2RN74 326 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 AMTNQ6UX39 209 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 FA2HQ7L5A8 372 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 MOGAT3Q86VF5 341 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 OR11H1Q8NG94 326 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 OR11H2Q8NH07 326 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
TPM3-215ENST00000469717 PRNDQ9UKY0 176 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 K7EQM0 130 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 SMAD7O15105 426 aaKnown RBP6.35□□□□□ -1.39
TPM3-215ENST00000469717 ID1P41134 155 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 ATP5G2Q06055 141 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 LCNL1Q6ZST4 164 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 GOLT1AQ6ZVE7 132 aa6.35□□□□□ -1.39
TPM3-215ENST00000469717 TMEM213A2RRL7 107 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 CECR9P0C854 216 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 HSD52Q0P140 79 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 INO80CQ6PI98 192 aaPredicted RBP6.34□□□□□ -1.39
TPM3-215ENST00000469717 Q9H3A6 140 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.39
TPM3-215ENST00000469717 SIVA1O15304 175 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 TCRAP04437 139 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 PRB3Q04118 309 aaPredicted RBP6.34□□□□□ -1.39
TPM3-215ENST00000469717 TCTEX1D4Q5JR98 221 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 ARPC1AQ92747 370 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 HARBI1Q96MB7 349 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 C17orf77Q96MU5 243 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 MRPL20Q9BYC9 149 aaKnown RBP6.34□□□□□ -1.39
TPM3-215ENST00000469717 D6R8Y8 96 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 C16orf97H3BN30 126 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 CR1LQ2VPA4 569 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 FAM216BQ8N7L0 139 aa6.34□□□□□ -1.39
TPM3-215ENST00000469717 ZNF714Q96N38 554 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms