RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 NIT1Q86X76 327 aa14.04□□□□□ -0.16
MCF2L-221ENST00000469415 C8orf49Q96NF6 230 aa14.04□□□□□ -0.16
MCF2L-221ENST00000469415 A8MWL6 223 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 CHEK1O14757 476 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 PAX1P15863 534 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 PRTN3P24158 256 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 Q86TA4 180 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 LY6G5BQ8NDX9 201 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 Q8TAT8 98 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 ZC2HC1AQ96GY0 325 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 DLEU1O43261 78 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 TOMM40O96008 361 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 ERASQ7Z444 233 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 FANCD2OSQ96PS1 177 aa14.03□□□□□ -0.16
MCF2L-221ENST00000469415 IGKV2-40A0A087WW87 121 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-221ENST00000469415 LINC01548A6NM66 108 aa14.02□□□□□ -0.16
MCF2L-221ENST00000469415 IGKV2D-40P01614 121 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-221ENST00000469415 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.16
MCF2L-221ENST00000469415 RNASE8Q8TDE3 154 aaKnown RBP14.02□□□□□ -0.16
MCF2L-221ENST00000469415 MLST8Q9BVC4 326 aa14.02□□□□□ -0.16
MCF2L-221ENST00000469415 BPESC1Q9GZL8 116 aa14.02□□□□□ -0.16
MCF2L-221ENST00000469415 SPATA45Q537H7 98 aa14.02□□□□□ -0.17
MCF2L-221ENST00000469415 TMEM219Q86XT9 240 aa14.02□□□□□ -0.17
MCF2L-221ENST00000469415 PMCHL2Q9BQD1 86 aa14.02□□□□□ -0.17
MCF2L-221ENST00000469415 MRPL27Q9P0M9 148 aaKnown RBP14.02□□□□□ -0.17
MCF2L-221ENST00000469415 LTAP01374 205 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 HBBP68871 147 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 FMC1Q96HJ9 113 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 ALKBH7Q9BT30 221 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-221ENST00000469415 CHRDL1Q9BU40 450 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 TRBV19A0A075B6N1 114 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 G3V318 75 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 C19orf84I3L1E1 186 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 FBXL19-AS1Q494R0 122 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 OR10J3Q5JRS4 329 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 FAM231DQ6ZW35 169 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 OTORQ9NRC9 128 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 C21orf62Q9NYP8 219 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 SERTM2A0A1B0GWG4 89 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 GPR183P32249 361 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 OR11H6Q8NGC7 330 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
MCF2L-221ENST00000469415 M0R143 59 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 ARMS2P0C7Q2 107 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 KLF12Q9Y4X4 402 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 TCTAP57738 103 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 FXYD7P58549 80 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 COTL1Q14019 142 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 PSG8Q9UQ74 426 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 TLN2Q9Y4G6 2542 aa14□□□□□ -0.17
MCF2L-221ENST00000469415 IGLV2-11P01706 119 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 MFAP4P55083 255 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 EBLN2Q6P2I7 272 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 TXN2Q99757 166 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 KIR2DL5BA0A0G2JN68 375 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 KIR2DL5BA0A0G2JPC4 375 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 GNLYP22749 145 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 C11orf71Q6IPW1 123 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 TEX43Q6ZNM6 134 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 KIR2DL5AQ8N109 375 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 UNQ5815/PRO19632Q6UWF5 114 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 SIGLEC15Q6ZMC9 328 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 Q8N976 141 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 RNF24Q9Y225 148 aa13.99□□□□□ -0.17
MCF2L-221ENST00000469415 ESDP10768 282 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 HOXB4P17483 251 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-221ENST00000469415 UCNP55089 124 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 PPP1R14DQ9NXH3 145 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 LOC389332A0A1B0GUA5 103 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 ZNF785A8K8V0 405 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 BRD3OSQ6XYD6 125 aa13.98□□□□□ -0.17
MCF2L-221ENST00000469415 H3BRN7 92 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 PLP1P60201 277 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 ZNF562Q6V9R5 426 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 RBPMS2Q6ZRY4 209 aaKnown RBP13.97□□□□□ -0.17
MCF2L-221ENST00000469415 TMEM75Q8N9X5 138 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 ZNF414Q96IQ9 312 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 SOX21Q9Y651 276 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-221ENST00000469415 C19orf71A6NCJ1 209 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 SAA4P35542 130 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 PVRIGQ6DKI7 326 aa13.97□□□□□ -0.17
MCF2L-221ENST00000469415 NEU4Q8WWR8 484 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-221ENST00000469415 CRIP1P50238 77 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 COX19Q49B96 90 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 Q6ZN92 141 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 SPATA12Q7Z6I5 190 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 PRSS22Q9GZN4 317 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 AAMDCQ9H7C9 122 aa13.96□□□□□ -0.17
MCF2L-221ENST00000469415 ZANQ9Y493 2812 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 FAM181BA6NEQ2 426 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 ODF3BA8MYP8 253 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 F8W735 103 aaPredicted RBP13.96□□□□□ -0.18
MCF2L-221ENST00000469415 CLEC3BP05452 202 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 C15orf32Q32M92 178 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 URB1-AS1Q96HZ7 61 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 MIEN1Q9BRT3 115 aa13.96□□□□□ -0.18
MCF2L-221ENST00000469415 IGLV11-55A0A075B6I3 123 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms