RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CFHR4Q92496 578 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 TMEM222Q9H0R3 208 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 IGHV3OR16-10A0A075B7F0 116 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 RHODO00212 210 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 SS18L1O75177 396 aaPredicted RBP8.07□□□□□ -1.12
NUP50-214ENST00000469163 CLDN14O95500 239 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 SLC38A11Q08AI6 406 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 OR4X2Q8NGF9 303 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
NUP50-214ENST00000469163 BSNQ9UPA5 3926 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 C9JAW5 83 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 SCTP09683 121 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 LINC00205P59089 165 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 POU2AF1Q16633 256 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 TBC1D26Q86UD7 250 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 HIGD1AQ9Y241 93 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 IGKV3D-15A0A087WSY6 115 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 IGHV1-24A0A0C4DH33 117 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 CRYGSP22914 178 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 SIGLEC15Q6ZMC9 328 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 RNF138Q8WVD3 245 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 AJUBAQ96IF1 538 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 METRNQ9UJH8 293 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 PTPRBP23467 1997 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 MOSP00540 346 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 RPL31P62899 125 aaKnown RBP8.06□□□□□ -1.12
NUP50-214ENST00000469163 WDR31Q8NA23 367 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 V9GYV3 84 aa8.06□□□□□ -1.12
NUP50-214ENST00000469163 ADAMTS20P59510 1910 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 FN1P02751 2386 aaKnown RBP8.05□□□□□ -1.12
NUP50-214ENST00000469163 CRXO43186 299 aaPredicted RBP8.05□□□□□ -1.12
NUP50-214ENST00000469163 SEC61GP60059 68 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 ZNF816Q0VGE8 651 aaPredicted RBP8.05□□□□□ -1.12
NUP50-214ENST00000469163 C1RLQ9NZP8 487 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 CELSR1Q9NYQ6 3014 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 KIR2DS1A0A191URI9 304 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
NUP50-214ENST00000469163 CSN3P07498 182 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 COX7A1P24310 79 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 KIR2DS1Q14954 304 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 FAM216BQ8N7L0 139 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
NUP50-214ENST00000469163 SSBP3Q9BWW4 388 aaPredicted RBP8.05□□□□□ -1.12
NUP50-214ENST00000469163 GCN1Q92616 2671 aaKnown RBP8.04□□□□□ -1.12
NUP50-214ENST00000469163 ZANQ9Y493 2812 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 J3KT08 172 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 MZT1Q08AG7 82 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 TMEM211Q6ICI0 200 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 ABHD14BQ96IU4 210 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 NPIPB13A6NJU9 1138 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 NPIPB4C9JG80 1138 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 RBP4P02753 201 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 FAM106CPP0CH98 169 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 FCER1GP30273 86 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 FAM106AQ4KMX7 169 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 OR1L1Q8NH94 360 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 ZNRD1Q9P1U0 126 aa8.04□□□□□ -1.12
NUP50-214ENST00000469163 IGHV3-72A0A0B4J1Y9 119 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 SYNGR2O43760 224 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 SRSF10O75494 262 aaKnown RBP8.03□□□□□ -1.12
NUP50-214ENST00000469163 HES1Q14469 280 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 COL27A1Q8IZC6 1860 aaPredicted RBP8.03□□□□□ -1.12
NUP50-214ENST00000469163 OR2H2O95918 312 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 CD24P25063 80 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 ZNF138P52744 262 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 ASPHD1Q5U4P2 390 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 SLC35E4Q6ICL7 350 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 IGFL3Q6UXB1 125 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 PPP1R27Q86WC6 154 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 SLC25A33Q9BSK2 321 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 IGLL5B9A064 214 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 H3BVH4 76 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 AREGP15514 252 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 ERVK11-1P61568 191 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
NUP50-214ENST00000469163 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
NUP50-214ENST00000469163 NPFFO15130 113 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 SRD5A1P18405 259 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 IGFL2Q6UWQ7 119 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 FBXL15Q9H469 300 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 MBD3L4A6NDZ8 208 aaPredicted RBP8.02□□□□□ -1.13
NUP50-214ENST00000469163 MBD3L3A6NE82 208 aaPredicted RBP8.02□□□□□ -1.13
NUP50-214ENST00000469163 MBD3L5A6NJ08 208 aaPredicted RBP8.02□□□□□ -1.13
NUP50-214ENST00000469163 FGF6P10767 208 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 FAM120AOSQ5T036 256 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 C10orf126Q8N4M7 172 aa8.02□□□□□ -1.13
NUP50-214ENST00000469163 MBD3L2Q8NHZ7 208 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms