RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 TMEM133Q9H2Q1 129 aa-1.69□□□□□ -2.68
SSB-208ENST00000468600 KIAA0100Q14667 2235 aaKnown RBP-1.7□□□□□ -2.68
SSB-208ENST00000468600 RNF213Q63HN8 5207 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 A8MWV9 139 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 M0R2T5 61 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 OR7C1O76099 320 aaPredicted RBP-1.7□□□□□ -2.68
SSB-208ENST00000468600 HAND1O96004 215 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 APOEP02649 317 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 NMBP08949 121 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 PDE6GP18545 87 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 RPL5P46777 297 aaKnown RBP-1.7□□□□□ -2.68
SSB-208ENST00000468600 ZNF56Q15929 161 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 SPAG11AQ6PDA7 123 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 ANKRD29Q8N6D5 301 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 SLC35B4Q969S0 331 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 RAB37Q96AX2 223 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 TMEM126AQ9H061 195 aa-1.7□□□□□ -2.68
SSB-208ENST00000468600 PPRC1Q5VV67 1664 aaKnown RBP-1.71□□□□□ -2.68
SSB-208ENST00000468600 PRRC2CQ9Y520 2896 aaKnown RBP-1.71□□□□□ -2.68
SSB-208ENST00000468600 PKHD1L1Q86WI1 4243 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 A0A087WTM6 91 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 C1orf196B1AJZ1 125 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 IGLV1-51P01701 117 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 DEFA1P59665 94 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 MED21Q13503 144 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 SNCBQ16143 134 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 PDZD9Q8IXQ8 264 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 TMEM86BQ8N661 226 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 RAB8BQ92930 207 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 PPP1R2P1Q96PQ5 205 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 RNF122Q9H9V4 155 aa-1.71□□□□□ -2.68
SSB-208ENST00000468600 IMP3Q9NV31 184 aaKnown RBP-1.71□□□□□ -2.68
SSB-208ENST00000468600 PLCE1Q9P212 2302 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 SOGA1O94964 1423 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 A0A0J9YY99 117 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 H7BYZ3 331 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 PSMD12O00232 456 aaPredicted RBP-1.72□□□□□ -2.68
SSB-208ENST00000468600 IGHV3-33P01772 117 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 RBP1P09455 135 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 TPM1P09493 284 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 RPS12P25398 132 aaKnown RBP-1.72□□□□□ -2.68
SSB-208ENST00000468600 CLEC6AQ6EIG7 209 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 C12orf45Q8N5I9 185 aaPredicted RBP-1.72□□□□□ -2.68
SSB-208ENST00000468600 C7orf50Q9BRJ6 194 aaKnown RBP-1.72□□□□□ -2.68
SSB-208ENST00000468600 PRO0255Q9UI72 69 aa-1.72□□□□□ -2.68
SSB-208ENST00000468600 MYO7BQ6PIF6 2116 aa-1.72□□□□□ -2.69
SSB-208ENST00000468600 COX5BP10606 129 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 BLVRAP53004 296 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 PSME3P61289 254 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 RHOBP62745 196 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 XAF1Q6GPH4 301 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 LINC00208Q96KT6 92 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 C2orf50Q96LR7 162 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 EVC2Q86UK5 1308 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 ROBO3Q96MS0 1386 aa-1.73□□□□□ -2.69
SSB-208ENST00000468600 WRNQ14191 1432 aaPredicted RBP eCLIP-1.74□□□□□ -2.69
SSB-208ENST00000468600 M0R233 179 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 SULT1C4O75897 302 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 CRYZL1O95825 349 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 SERPINE1P05121 402 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 AP2S1P53680 142 aaPredicted RBP-1.74□□□□□ -2.69
SSB-208ENST00000468600 SPOPLQ6IQ16 392 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 LINC00299Q6ZSB3 139 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 SPRR2FQ96RM1 72 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 FBXO5Q9UKT4 447 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 PKIGQ9Y2B9 76 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 LSM5Q9Y4Y9 91 aaKnown RBP-1.74□□□□□ -2.69
SSB-208ENST00000468600 SCN8AQ9UQD0 1980 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 ARHGAP31Q2M1Z3 1444 aa-1.74□□□□□ -2.69
SSB-208ENST00000468600 DNAH3Q8TD57 4116 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 HECW2Q9P2P5 1572 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 TRAV27A0A087WT01 109 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 C17orf112F2Z3M2 114 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 HADHBP55084 474 aaKnown RBP-1.75□□□□□ -2.69
SSB-208ENST00000468600 AP3S2P59780 193 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 EDDM3AQ14507 147 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 ARPINQ7Z6K5 226 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 MALSU1Q96EH3 234 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 TANC1Q9C0D5 1861 aa-1.75□□□□□ -2.69
SSB-208ENST00000468600 A0A096LNT2 108 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 TRAV26-2A0A0B4J265 109 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 F2Z2F3 143 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 SRIP30626 198 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 EIF5AP63241 154 aaKnown RBP-1.76□□□□□ -2.69
SSB-208ENST00000468600 HIST2H3PS2Q5TEC6 136 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 TMEM14EPQ6UXP3 125 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 KRT222Q8N1A0 295 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 STAG3L4Q8TBR4 150 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 OBSL1O75147 1896 aa-1.76□□□□□ -2.69
SSB-208ENST00000468600 BIVM-ERCC5R4GMW8 1640 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.77□□□□□ -2.696e-12■■■■■ 32.7
SSB-208ENST00000468600 RIF1Q5UIP0 2472 aaKnown RBP-1.77□□□□□ -2.69
SSB-208ENST00000468600 PTPRDP23468 1912 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 TRGV10A0A0A0MS01 117 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 A0A0D9SFI3 127 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 OR4C46A6NHA9 309 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 J3QRK9 145 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 M0QZ92 97 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 NDUFB3O43676 98 aa-1.77□□□□□ -2.69
SSB-208ENST00000468600 IGHV3-30P01768 117 aa-1.77□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms