RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RNF212Q495C1 297 aa17.26■□□□□ 0.35
PTCH1-210ENST00000468211 ZBTB8BQ8NAP8 495 aaPredicted RBP17.26■□□□□ 0.35
PTCH1-210ENST00000468211 FNDC10F2Z333 226 aa17.25■□□□□ 0.35
PTCH1-210ENST00000468211 SNRPCP09234 159 aaKnown RBP17.25■□□□□ 0.35
PTCH1-210ENST00000468211 OR10P1Q8NGE3 313 aa17.25■□□□□ 0.35
PTCH1-210ENST00000468211 ARV1Q9H2C2 271 aa17.25■□□□□ 0.35
PTCH1-210ENST00000468211 GSKIPQ9P0R6 139 aa17.25■□□□□ 0.35
PTCH1-210ENST00000468211 LYRM9A8MSI8 78 aa17.24■□□□□ 0.35
PTCH1-210ENST00000468211 DEFB130BP0DP73 79 aa17.24■□□□□ 0.35
PTCH1-210ENST00000468211 DEFB130AP0DP74 79 aa17.24■□□□□ 0.35
PTCH1-210ENST00000468211 RHOBP62745 196 aa17.24■□□□□ 0.35
PTCH1-210ENST00000468211 TEPPQ6URK8 271 aa17.24■□□□□ 0.35
PTCH1-210ENST00000468211 TSC22D2O75157 780 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 MBPP02686 304 aaPredicted RBP17.23■□□□□ 0.35
PTCH1-210ENST00000468211 IL7P13232 177 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 TSPOP30536 169 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 TAS2R30P59541 319 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 MITD1Q8WV92 249 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 MGAT4CQ9UBM8 478 aa17.23■□□□□ 0.35
PTCH1-210ENST00000468211 C7orf66A4D0T2 115 aa17.22■□□□□ 0.35
PTCH1-210ENST00000468211 B2MP61769 119 aa17.22■□□□□ 0.35
PTCH1-210ENST00000468211 LRRC20Q8TCA0 184 aa17.22■□□□□ 0.35
PTCH1-210ENST00000468211 MUC4Q99102 2169 aa17.21■□□□□ 0.35
PTCH1-210ENST00000468211 CCSO14618 274 aa17.21■□□□□ 0.35
PTCH1-210ENST00000468211 AGPAT2O15120 278 aa17.21■□□□□ 0.35
PTCH1-210ENST00000468211 MORN5Q5VZ52 161 aa17.21■□□□□ 0.35
PTCH1-210ENST00000468211 RPUSD4Q96CM3 377 aaKnown RBP17.21■□□□□ 0.35
PTCH1-210ENST00000468211 LINC01587Q99440 93 aa17.21■□□□□ 0.35
PTCH1-210ENST00000468211 CENPXA8MT69 81 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 GOSR2O14653 212 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 PLA2G10O15496 165 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 KIR3DS1Q14943 382 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 C15orf53Q8NAA6 179 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 MGST2Q99735 147 aa17.2■□□□□ 0.34
PTCH1-210ENST00000468211 ZNF331Q9NQX6 463 aaPredicted RBP17.2■□□□□ 0.34
PTCH1-210ENST00000468211 H3BTX0 84 aa17.19■□□□□ 0.34
PTCH1-210ENST00000468211 HTN1P15515 57 aa17.19■□□□□ 0.34
PTCH1-210ENST00000468211 ZNF546Q86UE3 836 aa17.19■□□□□ 0.34
PTCH1-210ENST00000468211 TMEM37Q8WXS4 190 aa17.19■□□□□ 0.34
PTCH1-210ENST00000468211 PPP1R14DQ9NXH3 145 aa17.19■□□□□ 0.34
PTCH1-210ENST00000468211 F5H768 121 aa17.18■□□□□ 0.34
PTCH1-210ENST00000468211 SLC17A3O00476 420 aa17.18■□□□□ 0.34
PTCH1-210ENST00000468211 TAS2R60P59551 318 aa17.18■□□□□ 0.34
PTCH1-210ENST00000468211 PXDC1Q5TGL8 231 aa17.18■□□□□ 0.34
PTCH1-210ENST00000468211 PARD6GQ9BYG4 376 aaPredicted RBP17.18■□□□□ 0.34
PTCH1-210ENST00000468211 C20orf85Q9H1P6 137 aa17.18■□□□□ 0.34
PTCH1-210ENST00000468211 PRAC2D3DTV9 90 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 MED14OSP0DP75 135 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 LCN15Q6UWW0 184 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 S100A7AQ86SG5 101 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 TMEM256Q8N2U0 113 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 GGACTQ9BVM4 153 aa17.17■□□□□ 0.34
PTCH1-210ENST00000468211 CDKN1BP46527 198 aa17.16■□□□□ 0.34
PTCH1-210ENST00000468211 OPCMLQ14982 345 aa17.16■□□□□ 0.34
PTCH1-210ENST00000468211 C11orf1Q9H5F2 150 aa17.16■□□□□ 0.34
PTCH1-210ENST00000468211 COX7A2P2O60397 106 aa17.15■□□□□ 0.34
PTCH1-210ENST00000468211 ATP5G1P05496 136 aa17.15■□□□□ 0.34
PTCH1-210ENST00000468211 CXCL2P19875 107 aa17.15■□□□□ 0.34
PTCH1-210ENST00000468211 ATP5G3P48201 142 aa17.15■□□□□ 0.34
PTCH1-210ENST00000468211 C1orf134Q5TEV5 83 aa17.15■□□□□ 0.34
PTCH1-210ENST00000468211 LSM5Q9Y4Y9 91 aaKnown RBP17.15■□□□□ 0.34
PTCH1-210ENST00000468211 CBY3A6NI87 242 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 H3BQ15 152 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 NUDT3O95989 172 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 BPIFA4PQ86YQ2 179 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 RNASE8Q8TDE3 154 aaKnown RBP17.14■□□□□ 0.33
PTCH1-210ENST00000468211 C16orf74Q96GX8 76 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 SEC22CQ9BRL7 303 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 SLC50A1Q9BRV3 221 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 ATG101Q9BSB4 218 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 NOP10Q9NPE3 64 aaKnown RBP17.14■□□□□ 0.33
PTCH1-210ENST00000468211 RNF24Q9Y225 148 aa17.14■□□□□ 0.33
PTCH1-210ENST00000468211 RYR1P21817 5038 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 L7N2F9 121 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 LYRM1O43325 122 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 IGLC2P0DOY2 106 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 FAM3BP58499 235 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-210ENST00000468211 VAMP2P63027 116 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 CNPY1Q3B7I2 92 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 C10orf113Q5VZT2 155 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 ZNF575Q86XF7 245 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 ZNRF2Q8NHG8 242 aa17.13■□□□□ 0.33
PTCH1-210ENST00000468211 SAT2Q96F10 170 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-210ENST00000468211 TIMM8BQ9Y5J9 83 aaPredicted RBP17.13■□□□□ 0.33
PTCH1-210ENST00000468211 TRAV6A0A075B6T7 132 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 TRAV5A0A0B4J249 113 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 FAM24AA6NFZ4 105 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 FAM25EA8MYX2 175 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 CST7O76096 145 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 TCRBP04435 133 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 CAMLGP49069 296 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 ZNF846Q147U1 533 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 SOHLH1Q5JUK2 328 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 MIC13Q5XKP0 118 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 NRARPQ7Z6K4 114 aa17.12■□□□□ 0.33
PTCH1-210ENST00000468211 BCAP31P51572 246 aa17.11■□□□□ 0.33
PTCH1-210ENST00000468211 GFI1BQ5VTD9 330 aa17.11■□□□□ 0.33
PTCH1-210ENST00000468211 TMEM263Q8WUH6 116 aaKnown RBP17.11■□□□□ 0.33
PTCH1-210ENST00000468211 RNF141Q8WVD5 230 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms