RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 Q9H3A6 140 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 TEP1Q99973 2627 aaKnown RBP9.85□□□□□ -0.83
COL4A1-202ENST00000467182 SCO2A0A1W2PP80 73 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 A0A1W2PS18 150 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 C2orf70A6NJV1 201 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 TMEM250H0YL14 139 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 CCL24O00175 119 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 PDE6DO43924 150 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 RANP62826 216 aaKnown RBP9.85□□□□□ -0.83
COL4A1-202ENST00000467182 SUMO1P63165 101 aaKnown RBP9.85□□□□□ -0.83
COL4A1-202ENST00000467182 PDE6HQ13956 83 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 AWAT1Q58HT5 328 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 CARHSP1Q9Y2V2 147 aaKnown RBP9.85□□□□□ -0.83
COL4A1-202ENST00000467182 MAST4O15021 2626 aa9.85□□□□□ -0.83
COL4A1-202ENST00000467182 PGPA6NDG6 321 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 F6UZH7 168 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 ZNF253O75346 499 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 ATF4P18848 351 aaPredicted RBP9.84□□□□□ -0.83
COL4A1-202ENST00000467182 GALR1P47211 349 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 EXOC3-AS1Q8N2X6 119 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 CITED1Q99966 193 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 NKX6-2Q9C056 277 aaPredicted RBP9.84□□□□□ -0.83
COL4A1-202ENST00000467182 OTORQ9NRC9 128 aa9.84□□□□□ -0.83
COL4A1-202ENST00000467182 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 F8W036 122 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 SOCS3O14543 225 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 CSN3P07498 182 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 CBLN1P23435 193 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 OR9G4Q8NGQ1 327 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 C2CD4CQ8TF44 421 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 GRAMD2BQ96HH9 432 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 PARLQ9H300 379 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 ZNF331Q9NQX6 463 aaPredicted RBP9.83□□□□□ -0.84
COL4A1-202ENST00000467182 MLXQ9UH92 298 aa9.83□□□□□ -0.84
COL4A1-202ENST00000467182 NIPBLQ6KC79 2804 aaeCLIP9.82□□□□□ -0.84
COL4A1-202ENST00000467182 ZNF785A8K8V0 405 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 FOLR2P14207 255 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 HLA-DMBP28068 263 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 GNG5P63218 68 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 GUCA2BQ16661 112 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 SOHLH1Q5JUK2 328 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 TCEAL7Q9BRU2 100 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 EPDR1Q9UM22 224 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 SELENOKQ9Y6D0 94 aa9.82□□□□□ -0.84
COL4A1-202ENST00000467182 SLC25A5P05141 298 aaKnown RBP9.81□□□□□ -0.84
COL4A1-202ENST00000467182 MEOX2P50222 304 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 CEBPGP53567 150 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 PSG9Q00887 426 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 IGFL4Q6B9Z1 124 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 TCF24Q7RTU0 167 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 C5orf17Q8NAS9 161 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
COL4A1-202ENST00000467182 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
COL4A1-202ENST00000467182 TRBV20OR9-2A0A075B6H5 130 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 HELTA6NFD8 242 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 M0R3E3 92 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 PEX7O00628 323 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 TCRAP04437 139 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 NRN1Q9NPD7 142 aa9.8□□□□□ -0.84
COL4A1-202ENST00000467182 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 OVOL1O14753 267 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 APOC3P02656 99 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 BMI1P35226 326 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 RPL35P42766 123 aaKnown RBP9.79□□□□□ -0.84
COL4A1-202ENST00000467182 ZNF674Q2M3X9 581 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 FAM74A3Q4VXF1 159 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 HIST1H2BAQ96A08 127 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 C20orf173Q96LM9 149 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 LINC00479Q96M42 142 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 SIGLEC8Q9NYZ4 499 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 KLF12Q9Y4X4 402 aa9.79□□□□□ -0.84
COL4A1-202ENST00000467182 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
COL4A1-202ENST00000467182 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 PRB4P10163 310 aaPredicted RBP9.78□□□□□ -0.84
COL4A1-202ENST00000467182 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 IGF2BP2-AS1Q96M15 143 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 SMIM7Q9BQ49 75 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 AAMDCQ9H7C9 122 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 SDF2L1Q9HCN8 221 aa9.78□□□□□ -0.84
COL4A1-202ENST00000467182 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 ZNF705FA8MVS1 300 aaPredicted RBP9.77□□□□□ -0.85
COL4A1-202ENST00000467182 C9JCJ5 164 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 PRAC2D3DTV9 90 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 M0QZ24 198 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 ISLRO14498 428 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 IGLV2-8P01709 118 aa9.77□□□□□ -0.85
COL4A1-202ENST00000467182 AKR1C3P42330 323 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms