RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 FOSL1P15407 271 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 MEOX2P50222 304 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 PSG9Q00887 426 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 KRTAP1-1Q07627 177 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 KCNIP4Q6PIL6 250 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 BAGE2Q86Y30 109 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 OR8I2Q8N0Y5 310 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 CMTM2Q8TAZ6 248 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 FMC1Q96HJ9 113 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 METTL26Q96S19 204 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 KLK15Q9H2R5 256 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 ZNF702PQ9H963 129 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 GNB4Q9HAV0 340 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 CRYBG3Q68DQ2 2970 aa7.35□□□□□ -1.23
APOBEC1-202ENST00000467171 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 TGIF2-C20orf24A0A0A6YYL0 155 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 LOC105371267A0A1B0GV96 52 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 C1orf196B1AJZ1 125 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 TYMSP04818 313 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 CXCL1P09341 107 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 ARL3P36405 182 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 RAB5BP61020 215 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 UBE2G1P62253 170 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 GNG5P63218 68 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 FOXE3Q13461 319 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 SIGLECL1Q8N7X8 197 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 RNF152Q8N8N0 203 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 OR4X2Q8NGF9 303 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 MYOZ3Q8TDC0 251 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 LINC00479Q96M42 142 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 MLST8Q9BVC4 326 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 AAMDCQ9H7C9 122 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 AURKAIP1Q9NWT8 199 aaPredicted RBP7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 SMAD5-AS1Q9Y6J3 95 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 URGCP-MRPS24S4R325 110 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 UNC79Q9P2D8 2635 aa7.34□□□□□ -1.23
APOBEC1-202ENST00000467171 SVEP1Q4LDE5 3571 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 FBLL1A6NHQ2 334 aaKnown RBP7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 H3BTX0 84 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 LTAP01374 205 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 SNRPCP09234 159 aaKnown RBP7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 ERVFC1-1P60608 527 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 SLC35B1P78383 322 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 C17orf77Q96MU5 243 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 SRD5A3Q9H8P0 318 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 TMEM160Q9NX00 188 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 IL36BQ9NZH7 164 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 V9GYV3 84 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 CCDC168Q8NDH2 2452 aa7.33□□□□□ -1.24
APOBEC1-202ENST00000467171 TRAV34A0A0B4J273 112 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 PPP5D1E7EU14 171 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 K7EMT4 169 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 K7EQM0 130 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 SLC17A3O00476 420 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 IGLV2-11P01706 119 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 CSN1S1P47710 185 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 RPL15P61313 204 aaKnown RBP7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 SCGB2A2Q13296 93 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 OR5I1Q13606 314 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 EXOC3-AS1Q8N2X6 119 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 CLEC5AQ9NY25 188 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 ZNF492Q9P255 531 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 PEF1Q9UBV8 284 aaKnown RBP7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 ZFP30Q9Y2G7 519 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 CR1P17927 2039 aa7.32□□□□□ -1.24
APOBEC1-202ENST00000467171 NBPF19A0A087WUL8 3843 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 IGHV3-35A0A0C4DH35 117 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 A0A1W2PS18 150 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 DIRC3C9JPN6 131 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 TRBV12-3P01733 135 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 IGHV3-11P01762 117 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 HNF1AP20823 631 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 TMEM95Q3KNT9 176 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 CDPF1Q6NVV7 123 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 C16orf54Q6UWD8 224 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 COX8CQ7Z4L0 72 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 Q86TA4 180 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 GPHB5Q86YW7 130 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 TMEM183AQ8IXX5 376 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 GLMPQ8WWB7 406 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 MRPL53Q96EL3 112 aaKnown RBP7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 SLC50A1Q9BRV3 221 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
APOBEC1-202ENST00000467171 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 ZNF785A8K8V0 405 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 MGST1P10620 155 aaKnown RBP7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 PSG3Q16557 428 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 CT83Q5H943 113 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 IBA57Q5T440 356 aaKnown RBP7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 UNQ9165/PRO28630Q6UXU0 137 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms