RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 H3BQV1 296 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 CCL16O15467 120 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 KLF7O75840 302 aaPredicted RBP1.35□□□□□ -2.19
VPS13A-209ENST00000467124 ANGP03950 147 aaKnown RBP1.35□□□□□ -2.19
VPS13A-209ENST00000467124 IFNA4P05014 189 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 ARL14EPLP0DKL9 152 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 RAB5CP51148 216 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 FAM74A1Q5RGS3 127 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 TEX29Q8N6K0 151 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 ODF3Q96PU9 254 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 TP53RKQ96S44 253 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 CCDC32Q9BV29 185 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 OR2H1Q9GZK4 316 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 TAF9BQ9HBM6 251 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 NUBP2Q9Y5Y2 271 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 NUP98P52948 1817 aa1.35□□□□□ -2.19
VPS13A-209ENST00000467124 E7EUB6 86 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 C17orf112F2Z3M2 114 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 ERC2-IT1O76042 136 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 RPL7P18124 248 aaKnown RBP1.34□□□□□ -2.19
VPS13A-209ENST00000467124 S100GP29377 79 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 DSCR4P56555 118 aaPredicted RBP1.34□□□□□ -2.19
VPS13A-209ENST00000467124 C2orf82Q6UX34 121 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 MUCL1Q96DR8 90 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 HYLS1Q96M11 299 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 CENPHQ9H3R5 247 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 LRTM1Q9HBL6 345 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 NIT2Q9NQR4 276 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 NDUFAF1Q9Y375 327 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 C22orf24Q9Y442 160 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 MGAMO43451 1857 aa1.34□□□□□ -2.19
VPS13A-209ENST00000467124 EXPH5Q8NEV8 1989 aa1.34□□□□□ -2.2
VPS13A-209ENST00000467124 HEATR1Q9H583 2144 aaKnown RBP1.33□□□□□ -2.2
VPS13A-209ENST00000467124 CAMSAP2Q08AD1 1489 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 GNG14A0A1W2PPG7 69 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 hDV103S1A0JD37 113 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 C9orf170A2RU37 121 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 CCL25O15444 150 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 PFDN1O60925 122 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 IL9P15248 144 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 RPL35P42766 123 aaKnown RBP1.33□□□□□ -2.2
VPS13A-209ENST00000467124 MPV17LQ2QL34 196 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 ZNF833PQ6ZTB9 187 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 PRR15Q8IV56 129 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 LRRC18Q8N456 261 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 FAM216BQ8N7L0 139 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 PATE1Q8WXA2 126 aa1.33□□□□□ -2.2
VPS13A-209ENST00000467124 TECTAO75443 2155 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 CACNA1BQ00975 2339 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 HELZ2Q9BYK8 2649 aaKnown RBP1.32□□□□□ -2.2
VPS13A-209ENST00000467124 LOC110117498A0A087WWA1 95 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 TRAV5A0A0B4J249 113 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 E7EQ34 232 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 F8W1H4 67 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 KPNA4O00629 521 aaPredicted RBP1.32□□□□□ -2.2
VPS13A-209ENST00000467124 BCL2P10415 239 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
VPS13A-209ENST00000467124 TMEM128Q5BJH2 165 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 SAMD13Q5VXD3 122 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 FAM19A2Q8N3H0 131 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 THEM6Q8WUY1 208 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 C4orf3Q8WVX3 66 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 LINC00052Q96N35 136 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 ORMDL1Q9P0S3 153 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 LAMTOR3Q9UHA4 124 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 COL6A6A6NMZ7 2263 aa1.32□□□□□ -2.2
VPS13A-209ENST00000467124 LAMB4A4D0S4 1761 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 CXCL8P10145 99 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 SDC2P34741 201 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 TFAMQ00059 246 aaKnown RBP1.31□□□□□ -2.2
VPS13A-209ENST00000467124 DR1Q01658 176 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 PHF5AQ7RTV0 110 aaKnown RBP1.31□□□□□ -2.2
VPS13A-209ENST00000467124 ARPINQ7Z6K5 226 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 ISOC1Q96CN7 298 aa1.31□□□□□ -2.2
VPS13A-209ENST00000467124 NCOA6Q14686 2063 aaPredicted RBP1.31□□□□□ -2.2
VPS13A-209ENST00000467124 IGHV1-58A0A0C4DH39 117 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 VMA21Q3ZAQ7 101 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 TEN1Q86WV5 123 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 OR5H6Q8NGV6 325 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 CCDC115Q96NT0 180 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 DDA1Q9BW61 102 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 LAMTOR2Q9Y2Q5 125 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 MED31Q9Y3C7 131 aa1.3□□□□□ -2.2
VPS13A-209ENST00000467124 TNRC6BQ9UPQ9 1833 aaKnown RBP1.3□□□□□ -2.2
VPS13A-209ENST00000467124 C5orf58C9J3I9 102 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 TSTD3H0UI37 97 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 H3BRM9 83 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 LYRM1O43325 122 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 POLR2HP52434 150 aaKnown RBP1.29□□□□□ -2.2
VPS13A-209ENST00000467124 CIRBPQ14011 172 aaKnown RBP1.29□□□□□ -2.2
VPS13A-209ENST00000467124 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 LINC00305Q7Z4B0 112 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
VPS13A-209ENST00000467124 TMEM138Q9NPI0 162 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 FKBP11Q9NYL4 201 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 TMEM14CQ9P0S9 112 aa1.29□□□□□ -2.2
VPS13A-209ENST00000467124 TRAV27A0A087WT01 109 aa1.28□□□□□ -2.2
VPS13A-209ENST00000467124 M0QZK8 103 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms