RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 MED28Q9H204 178 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 RNF122Q9H9V4 155 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 CXorf21Q9HAI6 301 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 AIG1Q9NVV5 245 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 NAT8Q9UHE5 227 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 HES2Q9Y543 173 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 SVILO95425 2214 aa2.39□□□□□ -2.03
CCDC58-203ENST00000466854 MYLKQ15746 1914 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 GOLGA4Q13439 2230 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 TRBV7-6A0A0J9YX20 115 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 FAM236AA0A1B0GUQ0 79 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 FAM236BA0A1B0GV22 79 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 SMIM31A0A1B0GVY4 71 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 CD300LBA8K4G0 201 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 I3L521 148 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 J3QRK9 145 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 M0R1X1 148 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 UBFD1O14562 309 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 CDC42EP2O14613 210 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 DEDDO75618 318 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 LTAP01374 205 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 TRGC2P03986 189 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 PAEPP09466 180 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 INAFM2P0DMQ5 153 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF823P16415 610 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 PSMB8P28062 276 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 RBMXP38159 391 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 CRADDP78560 199 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 EIF3IQ13347 325 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 DIAPH2-AS1Q14236 149 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 PDGFRLQ15198 375 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 VMA21Q3ZAQ7 101 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM244Q5VVB8 128 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 NXNL2Q5VZ03 156 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 RPL22L1Q6P5R6 122 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 LINC00596Q86U02 117 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 GKN2Q86XP6 184 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF695Q8IW36 515 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 FER1L6-AS1Q8NA97 138 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 C5orf17Q8NAS9 161 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 OR4K5Q8NGD3 323 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 LCN9Q8WX39 176 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM158Q8WZ71 300 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 RNASE6Q93091 150 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 BORCS8Q96FH0 119 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 IMMP1LQ96LU5 166 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF184Q99676 751 aaPredicted RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 MRPL20Q9BYC9 149 aaKnown RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 EFCAB1Q9HAE3 211 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF706Q9Y5V0 76 aaPredicted RBP2.38□□□□□ -2.03
CCDC58-203ENST00000466854 PTPRDP23468 1912 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 POLEQ07864 2286 aa2.38□□□□□ -2.03
CCDC58-203ENST00000466854 MTORP42345 2549 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 F5P12259 2224 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 CELSR2Q9HCU4 2923 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 DPRXA6NFQ7 191 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 TLCD2A6NGC4 264 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 KRBOX1C9JBD0 128 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 PEX7O00628 323 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 COX7A2LO14548 114 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF73O43830 326 aaPredicted RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 COX7A2P2O60397 106 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1-5P01602 117 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 IGLV1-47P01700 117 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 HLA-DQB1P01920 261 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 BGLAPP02818 100 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 AKAIN1P0CW23 69 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 IMPA1P29218 277 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF80P51504 273 aaPredicted RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 TMBIM6P55061 237 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 FOXA3P55318 350 aaPredicted RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 RBM11P57052 281 aaKnown RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 GNB2P62879 340 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 RTL8BQ17RB0 113 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM241Q24JQ0 296 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 EBLN2Q6P2I7 272 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 MDP1Q86V88 176 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM252Q8N6L7 170 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 RPS4Y2Q8TD47 263 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 MAGOHBQ96A72 148 aaKnown RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 ELSPBP1Q96BH3 223 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 GGTLC1Q9BX51 225 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 C1QTNF6Q9BXI9 259 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 WDR61Q9GZS3 305 aaKnown RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 Q9H3A6 140 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 SND1-IT1Q9HBX3 110 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 CBLN4Q9NTU7 201 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 NUFIP1Q9UHK0 495 aaKnown RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 RNF11Q9Y3C5 154 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 MRPS16Q9Y3D3 137 aaKnown RBP2.37□□□□□ -2.03
CCDC58-203ENST00000466854 V9GYS6 101 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 MED13Q9UHV7 2174 aa2.37□□□□□ -2.03
CCDC58-203ENST00000466854 PCDH15Q96QU1 1955 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 AKAP9Q99996 3911 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 DSCAMO60469 2012 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 CABIN1Q9Y6J0 2220 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 HIVEP3Q5T1R4 2406 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 A0A0D9SEW6 157 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms