RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ZNF550Q7Z398 422 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
VPS13D-203ENST00000466732 BAGE3Q86Y29 109 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 BAGE2Q86Y30 109 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 VKORC1L1Q8N0U8 176 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 GAPTQ8N292 157 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 TPRX1Q8N7U7 411 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PIFOQ8TCI5 191 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PPDPFLQ8WWR9 84 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 UBE2E3Q969T4 207 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 SLC25A44Q96H78 314 aaPredicted RBP2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PGLYRP3Q96LB9 341 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 GPR21Q99679 349 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 TMEM59Q9BXS4 323 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF442Q9H7R0 627 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 NAA60Q9H7X0 242 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 KLF12Q9Y4X4 402 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF236Q9UL36 1845 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ARHGAP21Q5T5U3 1957 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 OBSL1O75147 1896 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 CPAMD8Q8IZJ3 1885 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 LTBP4Q8N2S1 1624 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 IGHV7-81A0A0B4J1V7 117 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV1-2A0A0B4J238 106 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 CCL15-CCL14A0A0B4J2E2 113 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 A0A0J9YW62 118 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 C3orf85A0A1B0GTC6 90 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 LOC107986453A0A1B0GWG9 222 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF736B4DX44 427 aaPredicted RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 K7N7A8 449 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ARL6IP5O75915 188 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 IGHV3-7P01780 117 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 PRH1P02810 166 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ATP5G1P05496 136 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF688P0C7X2 276 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 SMIM13P0DJ93 91 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 BCL2P10415 239 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 PSMB8P28062 276 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ATP5G3P48201 142 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 FOXA3P55318 350 aaPredicted RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 TAS2R45P59539 299 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 DAZ2Q13117 558 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 NMSQ5H8A3 153 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ACP7Q6ZNF0 438 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 MRPL55Q7Z7F7 128 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 BPIFA4PQ86YQ2 179 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 APCDD1LQ8NCL9 501 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 OR9G1Q8NH87 305 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 SGMS2Q8NHU3 365 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 STAG3L4Q8TBR4 150 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 C7orf33Q8WU49 177 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 FGF14Q92915 247 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 KCNS1Q96KK3 526 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 FOXC2Q99958 501 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 DAZ3Q9NR90 486 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 KCNIP2Q9NS61 270 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF835Q9Y2P0 537 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 KLF13Q9Y2Y9 288 aaPredicted RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 DOCK4Q8N1I0 1966 aa2.39□□□□□ -2.03
VPS13D-203ENST00000466732 SNRNP200O75643 2136 aaKnown RBP2.39□□□□□ -2.03
VPS13D-203ENST00000466732 LOC285556D6RIA3 1793 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 ANAPC1Q9H1A4 1944 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 NACAE9PAV3 2078 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 KIAA1671Q9BY89 1806 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV1-1A0A0B4J248 108 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV26-2A0A0B4J265 109 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 A0A1B0GWB2 263 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 MYBPHLA2RUH7 354 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 GRIFINA4D1Z8 144 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 C5orf63A6NC05 138 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 A6NIN4 97 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 H7C1H1 209 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 M0R1B8 84 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 SDCBPO00560 298 aaPredicted RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 OR1I1O60431 355 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF324O75467 553 aaPredicted RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 DEDDO75618 318 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 P0DMU3 169 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 COX8AP10176 69 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 CRYGAP11844 174 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 CBLN1P23435 193 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 IL3RAP26951 378 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 PPP1CCP36873 323 aaKnown RBP2.38□□□□□ -2.03
VPS13D-203ENST00000466732 INSL3P51460 131 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 MTPNP58546 118 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 PPP1CBP62140 327 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 UBE2G1P62253 170 aa2.38□□□□□ -2.03
VPS13D-203ENST00000466732 LOXL1Q08397 574 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms