RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 DMBT1Q9UGM3 2413 aaPredicted RBP10.24□□□□□ -0.77
CXCR4-203ENST00000466288 NACAE9PAV3 2078 aa10.24□□□□□ -0.77
CXCR4-203ENST00000466288 FAM24AA6NFZ4 105 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 TMEM50AO95807 157 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 FAM3BP58499 235 aaPredicted RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 NHLH2Q02577 135 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 ATP6V1FQ16864 119 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 PSMG4Q5JS54 123 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 TOR2AQ5JU69 321 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 CCDC28AQ8IWP9 274 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 ATP5SQ99766 215 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 IGSF23A1L1A6 192 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 TMEM189A5PLL7 270 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 NUTF2P61970 127 aaKnown RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 RPP30P78346 268 aaKnown RBP10.23□□□□□ -0.77
CXCR4-203ENST00000466288 FAM74A1Q5RGS3 127 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 DPPA3Q6W0C5 159 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 C6orf223Q8N319 242 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 METTL26Q96S19 204 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 NIPSNAP3BQ9BS92 247 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 PSENENQ9NZ42 101 aa10.23□□□□□ -0.77
CXCR4-203ENST00000466288 HELTA6NFD8 242 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 H3BMM0 161 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 IFNA5P01569 189 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
CXCR4-203ENST00000466288 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 HTN3P15516 51 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 SPATA12Q7Z6I5 190 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 PCNPQ8WW12 178 aaKnown RBP10.21□□□□□ -0.78
CXCR4-203ENST00000466288 SMIM3Q9BZL3 60 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 WFDC1Q9HC57 220 aa10.21□□□□□ -0.78
CXCR4-203ENST00000466288 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.78
CXCR4-203ENST00000466288 ATP5IP56385 69 aaPredicted RBP10.2□□□□□ -0.78
CXCR4-203ENST00000466288 SPCS3P61009 180 aa10.2□□□□□ -0.78
CXCR4-203ENST00000466288 ERHP84090 104 aaKnown RBP10.2□□□□□ -0.78
CXCR4-203ENST00000466288 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
CXCR4-203ENST00000466288 SMDT1Q9H4I9 107 aa10.2□□□□□ -0.78
CXCR4-203ENST00000466288 RFNGQ9Y644 331 aa10.2□□□□□ -0.78
CXCR4-203ENST00000466288 U3KQE9 123 aa10.2□□□□□ -0.78
CXCR4-203ENST00000466288 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 HSPE1P61604 102 aaKnown RBP10.19□□□□□ -0.78
CXCR4-203ENST00000466288 SERF2P84101 59 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 OR4A16Q8NH70 328 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
CXCR4-203ENST00000466288 RBKSQ9H477 322 aa10.19□□□□□ -0.78
CXCR4-203ENST00000466288 DTD1Q8TEA8 209 aa10.18□□□□□ -0.78
CXCR4-203ENST00000466288 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
CXCR4-203ENST00000466288 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
CXCR4-203ENST00000466288 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
CXCR4-203ENST00000466288 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
CXCR4-203ENST00000466288 IGHV3OR16-12A0A075B7B8 117 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 CLN5O75503 358 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 CST7O76096 145 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 M6PRP20645 277 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 ATP6V0CP27449 155 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 RAB2AP61019 212 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 CLINT1Q14677 625 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 SPINK9Q5DT21 86 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 C16orf54Q6UWD8 224 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 GGACTQ9BVM4 153 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 FNDC4Q9H6D8 234 aaPredicted RBP10.17□□□□□ -0.78
CXCR4-203ENST00000466288 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 IGKV1-17P01599 117 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 CAMLGP49069 296 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 KRTAP10-2P60368 255 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
CXCR4-203ENST00000466288 MLANAQ16655 118 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 GDF5OSQ5U4N7 250 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 HSD17B11Q8NBQ5 300 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 OR10P1Q8NGE3 313 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 OR2G3Q8NGZ4 309 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 OR4X1Q8NH49 305 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 ATG101Q9BSB4 218 aa10.17□□□□□ -0.78
CXCR4-203ENST00000466288 CEBPZOSA8MTT3 80 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 INS-IGF2F8WCM5 200 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 HBE1P02100 147 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 SNCAP37840 140 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 FXYD7P58549 80 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 SPANXN5Q5MJ07 72 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 Q6ZRG5 221 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 PBDC1Q9BVG4 233 aa10.16□□□□□ -0.78
CXCR4-203ENST00000466288 TMEM147Q9BVK8 224 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms