RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR5G3P0C626 314 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 AP3S2P59780 193 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 MORN5Q5VZ52 161 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 C15orf53Q8NAA6 179 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 RNF141Q8WVD5 230 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 PSENENQ9NZ42 101 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 LINC00588Q9Y4M8 146 aa14.4□□□□□ -0.1
COL6A1-203ENST00000466285 NBDYA0A0U1RRE5 68 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 H3BTX0 84 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 METTL15P1P0C7V9 234 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 TSPOP30536 169 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 UBE2MP61081 183 aaKnown RBP14.39□□□□□ -0.11
COL6A1-203ENST00000466285 RPP30P78346 268 aaKnown RBP14.39□□□□□ -0.11
COL6A1-203ENST00000466285 ARL16Q0P5N6 197 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 KRTAP1-5Q9BYS1 174 aa14.39□□□□□ -0.11
COL6A1-203ENST00000466285 PRAC2D3DTV9 90 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 SLC17A3O00476 420 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 HYPMO75409 117 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 HTN1P15515 57 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 BTCP35070 178 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 PLP1P60201 277 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 TRIQKQ629K1 86 aa14.38□□□□□ -0.11
COL6A1-203ENST00000466285 PLA2G10O15496 165 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 RPL7P18124 248 aaKnown RBP14.37□□□□□ -0.11
COL6A1-203ENST00000466285 RAP2BP61225 183 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 RHOBP62745 196 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 IFITM3Q01628 133 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 PSG3Q16557 428 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 SOHLH1Q5JUK2 328 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 TMEM14EPQ6UXP3 125 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 LINC01587Q99440 93 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 ATG101Q9BSB4 218 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 ARL6Q9H0F7 186 aa14.37□□□□□ -0.11
COL6A1-203ENST00000466285 RCL1Q9Y2P8 373 aaKnown RBP14.37□□□□□ -0.11
COL6A1-203ENST00000466285 PIGBOS1A0A0B4J2F0 54 aa14.36□□□□□ -0.11
COL6A1-203ENST00000466285 UPK1BO75841 260 aa14.36□□□□□ -0.11
COL6A1-203ENST00000466285 ANXA7P20073 488 aaKnown RBP14.36□□□□□ -0.11
COL6A1-203ENST00000466285 DLK1P80370 383 aa14.36□□□□□ -0.11
COL6A1-203ENST00000466285 RNASE8Q8TDE3 154 aaKnown RBP14.36□□□□□ -0.11
COL6A1-203ENST00000466285 RPUSD4Q96CM3 377 aaKnown RBP14.36□□□□□ -0.11
COL6A1-203ENST00000466285 LINC00854A0A1B0GVQ3 168 aa14.35□□□□□ -0.11
COL6A1-203ENST00000466285 NAP1L6A6NFF2 107 aa14.35□□□□□ -0.11
COL6A1-203ENST00000466285 NDUFB6O95139 128 aa14.35□□□□□ -0.11
COL6A1-203ENST00000466285 SCGB1D2O95969 90 aa14.35□□□□□ -0.11
COL6A1-203ENST00000466285 ZBTB8BQ8NAP8 495 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-203ENST00000466285 ARV1Q9H2C2 271 aa14.35□□□□□ -0.11
COL6A1-203ENST00000466285 NOP10Q9NPE3 64 aaKnown RBP14.35□□□□□ -0.11
COL6A1-203ENST00000466285 C16orf90A8MZG2 172 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 ATP5G1P05496 136 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 ATP5G3P48201 142 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 TAS2R60P59551 318 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 C6orf223Q8N319 242 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 SMIM8Q96KF7 97 aa14.34□□□□□ -0.11
COL6A1-203ENST00000466285 K7EPK0 472 aa14.33□□□□□ -0.12
COL6A1-203ENST00000466285 OR4E1P0C645 316 aa14.33□□□□□ -0.12
COL6A1-203ENST00000466285 HOXA5P20719 270 aa14.33□□□□□ -0.12
COL6A1-203ENST00000466285 FAM3BP58499 235 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-203ENST00000466285 GFI1BQ5VTD9 330 aa14.33□□□□□ -0.12
COL6A1-203ENST00000466285 C16orf74Q96GX8 76 aa14.33□□□□□ -0.12
COL6A1-203ENST00000466285 ZNF331Q9NQX6 463 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-203ENST00000466285 CBY3A6NI87 242 aa14.32□□□□□ -0.12
COL6A1-203ENST00000466285 ASAH1Q13510 395 aa14.32□□□□□ -0.12
COL6A1-203ENST00000466285 MGST2Q99735 147 aa14.32□□□□□ -0.12
COL6A1-203ENST00000466285 CCSO14618 274 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 LYRM1O43325 122 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 CDKN1BP46527 198 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 SELENOTP62341 195 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 LINC00305Q7Z4B0 112 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 TMEM256Q8N2U0 113 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 TMEM263Q8WUH6 116 aaKnown RBP14.31□□□□□ -0.12
COL6A1-203ENST00000466285 TMEM37Q8WXS4 190 aa14.31□□□□□ -0.12
COL6A1-203ENST00000466285 H3BQ15 152 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 J3KRW8 73 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 AGPAT2O15120 278 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 B2MP61769 119 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 OPCMLQ14982 345 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 IAH1Q2TAA2 248 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-203ENST00000466285 LINC00612Q8N6U2 182 aa14.3□□□□□ -0.12
COL6A1-203ENST00000466285 TIMM8BQ9Y5J9 83 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-203ENST00000466285 TRAV26-1A0A087WT03 109 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 A0A0J9YY99 117 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 INPP1P49441 399 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 TEPPQ6URK8 271 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 LRRC20Q8TCA0 184 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 NPVFQ9HCQ7 196 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 PPP1R14DQ9NXH3 145 aa14.29□□□□□ -0.12
COL6A1-203ENST00000466285 TRAV5A0A0B4J249 113 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 C7orf66A4D0T2 115 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 FNDC10F2Z333 226 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 MBPP02686 304 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-203ENST00000466285 IGLC2P0DOY2 106 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 C4orf46Q504U0 113 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 LCN15Q6UWW0 184 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 ZNF546Q86UE3 836 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 MAPKAPK5-AS1Q8N8E1 139 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 OR10P1Q8NGE3 313 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 MGAT4CQ9UBM8 478 aa14.28□□□□□ -0.12
COL6A1-203ENST00000466285 GAGE12BA1L429 117 aa14.27□□□□□ -0.13
COL6A1-203ENST00000466285 CENPXA8MT69 81 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms