RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PSG1P11464 419 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 ARL3P36405 182 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 IMMP2LQ96T52 175 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 PYGO2Q9BRQ0 406 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
EXOSC3-203ENST00000465229 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 A0A087WW49 117 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 S100PP25815 95 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 TIGITQ495A1 244 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 FAM210BQ96KR6 192 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 HIGD1AQ9Y241 93 aa12.98□□□□□ -0.33
EXOSC3-203ENST00000465229 VWFP04275 2813 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 TGIF2-C20orf24A0A0A6YYL0 155 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 TOMM40O96008 361 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 RD3LP0DJH9 198 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 RPS10P46783 165 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 RAX2Q96IS3 184 aa12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 MRPL27Q9P0M9 148 aaKnown RBP12.97□□□□□ -0.33
EXOSC3-203ENST00000465229 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 HELTA6NFD8 242 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 GGCTO75223 188 aaKnown RBP12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 PYYP10082 97 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 CRYBB3P26998 211 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 GALR1P47211 349 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 OCC1Q8TAD7 63 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
EXOSC3-203ENST00000465229 LINC01619G3V211 115 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 CCL24O00175 119 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 MYCNOSP40205 109 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 SHISA2Q6UWI4 295 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 DPF1Q92782 380 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 SFRP2Q96HF1 295 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 ELOVL1Q9BW60 279 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 GP9P14770 177 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 TAS2R60P59551 318 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 FHL3Q13643 280 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
EXOSC3-203ENST00000465229 TRRAPQ9Y4A5 3859 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 GNG4P50150 75 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 LYZP61626 148 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 RPEL1Q2QD12 228 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 KCNIP4Q6PIL6 250 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 SLC25A39Q9BZJ4 359 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
EXOSC3-203ENST00000465229 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 NBEAP1P0C6P0 100 aa12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 RELQ04864 619 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 ZNF600Q6ZNG1 722 aa12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 GPHB5Q86YW7 130 aa12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 SRD5A3Q9H8P0 318 aa12.93□□□□□ -0.34
EXOSC3-203ENST00000465229 PGPEP1LA6NFU8 196 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 S100A6P06703 90 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 SLURP1P55000 103 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 CENPWQ5EE01 88 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 RNF125Q96EQ8 232 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 ANK2Q01484 3957 aa12.92□□□□□ -0.34
EXOSC3-203ENST00000465229 C5orf52A6NGY3 159 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 H3BRN7 92 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 K7EN84 100 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 NDUFA4O00483 81 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 TYMSP04818 313 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 KRTAP21-3Q3LHN1 58 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 TOMM20LQ6UXN7 152 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 UNQ9165/PRO28630Q6UXU0 137 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 OR10G8Q8NGN5 311 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 IGF2BP2-AS1Q96M15 143 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 SAV1Q9H4B6 383 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 PEX7O00628 323 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 FAM106AQ4KMX7 169 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 OR4F17Q8NGA8 305 aa12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
EXOSC3-203ENST00000465229 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
EXOSC3-203ENST00000465229 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
EXOSC3-203ENST00000465229 S100A9P06702 114 aaKnown RBP12.9□□□□□ -0.34
EXOSC3-203ENST00000465229 ZFAND3Q9H8U3 227 aa12.9□□□□□ -0.34
EXOSC3-203ENST00000465229 EPDR1Q9UM22 224 aa12.9□□□□□ -0.34
EXOSC3-203ENST00000465229 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 UBE2CO00762 179 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 GCGP01275 180 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms