RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 GNG12Q9UBI6 72 aa4.55□□□□□ -1.68
SSBP1-204ENST00000465167 LINC00527Q9UJ94 153 aa4.55□□□□□ -1.68
SSBP1-204ENST00000465167 PSG11Q9UQ72 335 aa4.55□□□□□ -1.68
SSBP1-204ENST00000465167 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
SSBP1-204ENST00000465167 RBM7Q9Y580 266 aaKnown RBP4.55□□□□□ -1.68
SSBP1-204ENST00000465167 TMEM56-RWDD3S4R434 201 aa4.55□□□□□ -1.68
SSBP1-204ENST00000465167 IGHV3-72A0A0B4J1Y9 119 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 TRAV24A0A0B4J272 114 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 C3orf85A0A1B0GTC6 90 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 FAM24AA6NFZ4 105 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 CCL25O15444 150 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 SSSCA1O60232 199 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 ZNF253O75346 499 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 IGHG2P01859 326 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 CRISP2P16562 243 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 CD1BP29016 333 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 TMEM50BP56557 158 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 KRTAP10-11P60412 298 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 OR10J3Q5JRS4 329 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 PLPPR1Q8TBJ4 325 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 MRPL30Q8TCC3 161 aaKnown RBP4.54□□□□□ -1.68
SSBP1-204ENST00000465167 C4orf3Q8WVX3 66 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 TMEM222Q9H0R3 208 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 PARLQ9H300 379 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 BANF2Q9H503 90 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 PLEKHJ1Q9NW61 149 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 U3KQK5 164 aa4.54□□□□□ -1.68
SSBP1-204ENST00000465167 TRRAPQ9Y4A5 3859 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 PKD1L1Q8TDX9 2849 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 IGHV3-43A0A0B4J1X8 118 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 A0A1B0GV72 72 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 ZNF320A2RRD8 509 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 FAM90A26D6RGX4 464 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 H0Y980 276 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 CTXN2P0C2S0 81 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 IGLC2P0DOY2 106 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 IGHV3-43DP0DP04 118 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 CTRLP40313 264 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 INSL3P51460 131 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 RHOBP62745 196 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 KIR2DS1Q14954 304 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 PLGLAQ15195 96 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 MMDQ15546 238 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 VAMP3Q15836 100 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 PSG3Q16557 428 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 CST9LP1Q5W188 147 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 Q6ZS49 121 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 LYZL2Q7Z4W2 148 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 HAPLN4Q86UW8 402 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 BAGE2Q86Y30 109 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 LINC00311Q8N616 119 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 ZNF709Q8N972 641 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 C8orf31Q8N9H6 132 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 Q8N9W7 124 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 NECAP1Q8NC96 275 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 Q8NFD4 153 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 VN1R17PQ8TDU5 208 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 GPR146Q96CH1 333 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 KCNS1Q96KK3 526 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 DUX3Q96PT4 197 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 HSPB9Q9BQS6 159 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 CST9LQ9H4G1 147 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 LINC00574Q9H8X3 128 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 SLC39A9Q9NUM3 307 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 RPH3ALQ9UNE2 315 aa4.53□□□□□ -1.68
SSBP1-204ENST00000465167 IGLV5-39A0A0G2JS06 123 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 FAM90A10PA6NDY2 464 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 S1PR2O95136 353 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 NDUFB4O95168 129 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 NBEAP1P0C6P0 100 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 CGB3P0DN86 165 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 CGB7P0DN87 165 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 TSPOP30536 169 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 EBI3Q14213 229 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 DIAPH2-AS1Q14236 149 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 DEFB136Q30KP8 78 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 ODF3L2Q3SX64 289 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 FAM78BQ5VT40 261 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 MRPL54Q6P161 138 aaKnown RBP4.52□□□□□ -1.69
SSBP1-204ENST00000465167 LCN15Q6UWW0 184 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 ZNF497Q6ZNH5 498 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 SLC25A48Q6ZT89 311 aaKnown RBP4.52□□□□□ -1.69
SSBP1-204ENST00000465167 C18orf65Q6ZTR6 163 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 GTF2H5Q6ZYL4 71 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 NIT1Q86X76 327 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 MTURNQ8N3F0 131 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 OR10V1Q8NGI7 309 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 OR1L6Q8NGR2 347 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 UBALD1Q8TB05 177 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
SSBP1-204ENST00000465167 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 S1PR3Q99500 378 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 PMCHL2Q9BQD1 86 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 KCNIP2Q9NS61 270 aa4.52□□□□□ -1.69
SSBP1-204ENST00000465167 ZNF256Q9Y2P7 627 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms