RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 RAB2AP61019 212 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 ACOT6Q3I5F7 207 aaPredicted RBP13.94□□□□□ -0.18
LMNB1-204ENST00000463908 LGALSLQ3ZCW2 172 aaPredicted RBP13.94□□□□□ -0.18
LMNB1-204ENST00000463908 GDF5OSQ5U4N7 250 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 SAMD13Q5VXD3 122 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 RNF182Q8N6D2 247 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 ZNF503Q96F45 646 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 ARPC5LQ9BPX5 153 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 TM2D3Q9BRN9 247 aa13.94□□□□□ -0.18
LMNB1-204ENST00000463908 SLC17A3O00476 420 aa13.93□□□□□ -0.18
LMNB1-204ENST00000463908 NHLRC4P0CG21 123 aaPredicted RBP13.93□□□□□ -0.18
LMNB1-204ENST00000463908 SERF2P84101 59 aa13.93□□□□□ -0.18
LMNB1-204ENST00000463908 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
LMNB1-204ENST00000463908 TMUB2Q71RG4 321 aa13.93□□□□□ -0.18
LMNB1-204ENST00000463908 GNPNAT1Q96EK6 184 aaPredicted RBP13.93□□□□□ -0.18
LMNB1-204ENST00000463908 HIST1H1EP10412 219 aaKnown RBP13.92□□□□□ -0.18
LMNB1-204ENST00000463908 RHOBP62745 196 aa13.92□□□□□ -0.18
LMNB1-204ENST00000463908 TRPT1Q86TN4 253 aaKnown RBP13.92□□□□□ -0.18
LMNB1-204ENST00000463908 RPP25LQ8N5L8 163 aaKnown RBP13.92□□□□□ -0.18
LMNB1-204ENST00000463908 OR10G4Q8NGN3 311 aa13.92□□□□□ -0.18
LMNB1-204ENST00000463908 OR10G9Q8NGN4 311 aa13.92□□□□□ -0.18
LMNB1-204ENST00000463908 OR10G7Q8NGN6 311 aa13.92□□□□□ -0.18
LMNB1-204ENST00000463908 OR51M1Q9H341 326 aa13.92□□□□□ -0.18
LMNB1-204ENST00000463908 ZNF331Q9NQX6 463 aaPredicted RBP13.92□□□□□ -0.18
LMNB1-204ENST00000463908 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
LMNB1-204ENST00000463908 TRBV19A0A075B6N1 114 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 F6UB75 175 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 H3BMM0 161 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 NDUFB4O95168 129 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 LCN15Q6UWW0 184 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 STHQ8IWL8 128 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 FXYD5Q96DB9 178 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 SAV1Q9H4B6 383 aaPredicted RBP13.91□□□□□ -0.18
LMNB1-204ENST00000463908 RPRMQ9NS64 109 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 PLA2G2EQ9NZK7 142 aa13.91□□□□□ -0.18
LMNB1-204ENST00000463908 KIR2DL5BA0A0G2JN68 375 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 KIR2DL5BA0A0G2JPC4 375 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 BCL2L11O43521 198 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 PSG3Q16557 428 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 GUK1Q16774 197 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 FAM122CQ6P4D5 195 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 KIR2DL5AQ8N109 375 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 KIR2DL5BQ8NHK3 375 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 LRRC20Q8TCA0 184 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 HYLS1Q96M11 299 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 COL7A1Q02388 2944 aa13.9□□□□□ -0.18
LMNB1-204ENST00000463908 GIG44P09565 113 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-204ENST00000463908 PRB4P10163 310 aaPredicted RBP13.89□□□□□ -0.19
LMNB1-204ENST00000463908 SPP1P10451 314 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 HLA-DRB4P13762 266 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 APOC4P55056 127 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 FOXI2Q6ZQN5 318 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 RNF141Q8WVD5 230 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 SLC50A1Q9BRV3 221 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 RETNQ9HD89 108 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 HLA-DRB4X5D2U9 266 aa13.89□□□□□ -0.19
LMNB1-204ENST00000463908 A0A0J9YX75 114 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 A0A1W2PPV4 95 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 KANTRA0A1W2PQU2 76 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF705FA8MVS1 300 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-204ENST00000463908 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF253O75346 499 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 MBP02144 154 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 OR10J4P0C629 311 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 NBEAP1P0C6P0 100 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 BLNKQ8WV28 456 aa13.88□□□□□ -0.19
LMNB1-204ENST00000463908 AGRNO00468 2067 aa13.87□□□□□ -0.19
LMNB1-204ENST00000463908 UBE2CO00762 179 aa13.87□□□□□ -0.19
LMNB1-204ENST00000463908 TMEM41BQ5BJD5 291 aa13.87□□□□□ -0.19
LMNB1-204ENST00000463908 RAB24Q969Q5 203 aa13.87□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF471Q9BX82 626 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-204ENST00000463908 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 OR7C2O60412 319 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 PFDN1O60925 122 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF705DP0CH99 300 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF705BP0CI00 300 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-204ENST00000463908 CDC34P49427 236 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-204ENST00000463908 TAS2R45P59539 299 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 KHDC3LQ587J8 217 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 Q6ZWC4 215 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 SSX7Q7RTT5 188 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 SPATA25Q9BR10 227 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 OVOL2Q9BRP0 275 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
LMNB1-204ENST00000463908 IGKV3-20P01619 116 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 STAG3L2P0CL84 134 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 STAG3L3P0CL85 134 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 PDE6HQ13956 83 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 ZNF726P1Q15940 193 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 EBLN2Q6P2I7 272 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 EXOC3-AS1Q8N2X6 119 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
LMNB1-204ENST00000463908 CLUHP3Q96NS8 147 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-204ENST00000463908 U3KQK5 164 aa13.85□□□□□ -0.19
LMNB1-204ENST00000463908 A8MTW9 85 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 SEC11BP0C7V7 166 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms