RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CRXO43186 299 aaPredicted RBP13.41□□□□□ -0.26
SF3A1-205ENST00000463818 SLC38A11Q08AI6 406 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 OXA1LQ15070 435 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 SPINK13Q1W4C9 94 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 LRRC20Q8TCA0 184 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 ARV1Q9H2C2 271 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 INMT-MINDY4F8WBC2 141 aa13.4□□□□□ -0.26
SF3A1-205ENST00000463818 PRM2P04554 102 aa13.4□□□□□ -0.26
SF3A1-205ENST00000463818 HTN3P15516 51 aa13.4□□□□□ -0.26
SF3A1-205ENST00000463818 GGACTQ9BVM4 153 aa13.4□□□□□ -0.26
SF3A1-205ENST00000463818 GPN1Q9HCN4 374 aaPredicted RBP13.4□□□□□ -0.26
SF3A1-205ENST00000463818 A0A087X0K7 114 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 ZNF705GA8MUZ8 300 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-205ENST00000463818 CCSO14618 274 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 GOSR2O14653 212 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 PTTG1O95997 202 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 INSP01308 110 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 CXCL3P19876 107 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 DAD1P61803 113 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 PSG3Q16557 428 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
SF3A1-205ENST00000463818 L7N2F9 121 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 AGPAT2O15120 278 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
SF3A1-205ENST00000463818 RHOBP62745 196 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 VAMP2P63027 116 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 HIST1H1AQ02539 215 aaPredicted RBP13.38□□□□□ -0.27
SF3A1-205ENST00000463818 OR8A1Q8NGG7 326 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 C2orf50Q96LR7 162 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 RNF24Q9Y225 148 aa13.38□□□□□ -0.27
SF3A1-205ENST00000463818 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 M0R2N4 97 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 PRB4P10163 310 aaPredicted RBP13.37□□□□□ -0.27
SF3A1-205ENST00000463818 B2MP61769 119 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 LINC00305Q7Z4B0 112 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 ZNF546Q86UE3 836 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 BAP18Q8IXM2 172 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 PPP1R14DQ9NXH3 145 aa13.37□□□□□ -0.27
SF3A1-205ENST00000463818 LSM5Q9Y4Y9 91 aaKnown RBP13.37□□□□□ -0.27
SF3A1-205ENST00000463818 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
SF3A1-205ENST00000463818 SNRPCP09234 159 aaKnown RBP13.36□□□□□ -0.27
SF3A1-205ENST00000463818 BCAP31P51572 246 aa13.36□□□□□ -0.27
SF3A1-205ENST00000463818 RPUSD4Q96CM3 377 aaKnown RBP13.36□□□□□ -0.27
SF3A1-205ENST00000463818 MGST2Q99735 147 aa13.36□□□□□ -0.27
SF3A1-205ENST00000463818 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 AZU1P20160 251 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 UBE2DNLQ8IWF7 75 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 TMEM37Q8WXS4 190 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 LINC01587Q99440 93 aa13.35□□□□□ -0.27
SF3A1-205ENST00000463818 HERC2O95714 4834 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 LYRM9A8MSI8 78 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 COX7A2P2O60397 106 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 TMEM88Q6PEY1 159 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 ZNF331Q9NQX6 463 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-205ENST00000463818 DNAH17Q9UFH2 4485 aa13.34□□□□□ -0.27
SF3A1-205ENST00000463818 HECTD4Q9Y4D8 3996 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 CST7O76096 145 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 DEFB130BP0DP73 79 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 DEFB130AP0DP74 79 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 CXCL2P19875 107 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 TSPOP30536 169 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 CAMLGP49069 296 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 CAV2P51636 162 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 RAB31Q13636 194 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 LGALS9BQ3B8N2 356 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 MORN5Q5VZ52 161 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 LCN15Q6UWW0 184 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 NMES1Q9C002 83 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 DNAJC4Q9NNZ3 241 aa13.33□□□□□ -0.28
SF3A1-205ENST00000463818 H3BTX0 84 aa13.32□□□□□ -0.28
SF3A1-205ENST00000463818 OPCMLQ14982 345 aa13.32□□□□□ -0.28
SF3A1-205ENST00000463818 FCN2Q15485 313 aa13.32□□□□□ -0.28
SF3A1-205ENST00000463818 SLC50A1Q9BRV3 221 aa13.32□□□□□ -0.28
SF3A1-205ENST00000463818 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 PLAC8L1A1L4L8 177 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 HTN1P15515 57 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 H2BFSP57053 126 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 TAS2R60P59551 318 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 RAB32Q13637 225 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 RNF212Q495C1 297 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 MIC13Q5XKP0 118 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 Q6ZRG5 221 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 TMEM256Q8N2U0 113 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
SF3A1-205ENST00000463818 DNAH2Q9P225 4427 aa13.31□□□□□ -0.28
SF3A1-205ENST00000463818 PRAC2D3DTV9 90 aa13.3□□□□□ -0.28
SF3A1-205ENST00000463818 RTL8CO15255 209 aa13.3□□□□□ -0.28
SF3A1-205ENST00000463818 PVALBP20472 110 aaPredicted RBP13.3□□□□□ -0.28
SF3A1-205ENST00000463818 CDKN1BP46527 198 aa13.3□□□□□ -0.28
SF3A1-205ENST00000463818 CYCSP99999 105 aaKnown RBP13.3□□□□□ -0.28
SF3A1-205ENST00000463818 UQCC1Q9NVA1 299 aa13.3□□□□□ -0.28
SF3A1-205ENST00000463818 TRAV5A0A0B4J249 113 aa13.29□□□□□ -0.28
SF3A1-205ENST00000463818 H3BQ15 152 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms