RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PRR20AP86496 221 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 ZNF705AQ6ZN79 300 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-202ENST00000463440 CHAC2Q8WUX2 184 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 RYR2Q92736 4967 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 NEU1Q99519 415 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 GOLT1BQ9Y3E0 138 aa11.73□□□□□ -0.53
COL1A1-202ENST00000463440 IGHV3OR16-12A0A075B7B8 117 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 SMIM9A6NGZ8 99 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 ZNF705FA8MVS1 300 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-202ENST00000463440 MRPS12O15235 138 aaKnown RBP11.72□□□□□ -0.53
COL1A1-202ENST00000463440 AMBPP02760 352 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 ZNF705DP0CH99 300 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-202ENST00000463440 ZNF705BP0CI00 300 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-202ENST00000463440 CXCL3P19876 107 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
COL1A1-202ENST00000463440 H2BFSP57053 126 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 B2MP61769 119 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 NHLH2Q02577 135 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 OPCMLQ14982 345 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 LINC00476Q8WZB0 136 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 LYSTQ99698 3801 aa11.72□□□□□ -0.53
COL1A1-202ENST00000463440 C11orf94C9JXX5 98 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 PET100P0DJ07 73 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 HLA-DMBP28068 263 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 PSG3Q16557 428 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 PXMP4Q9Y6I8 212 aa11.71□□□□□ -0.53
COL1A1-202ENST00000463440 TMEM189A5PLL7 270 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 H0YIZ8 118 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 LY6G6CO95867 125 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 C2CD4CQ8TF44 421 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
COL1A1-202ENST00000463440 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
COL1A1-202ENST00000463440 HIST1H1AQ02539 215 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-202ENST00000463440 OR11H7Q8NGC8 314 aa11.69□□□□□ -0.54
COL1A1-202ENST00000463440 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
COL1A1-202ENST00000463440 RPUSD4Q96CM3 377 aaKnown RBP11.69□□□□□ -0.54
COL1A1-202ENST00000463440 IGF2BP2-AS1Q96M15 143 aa11.69□□□□□ -0.54
COL1A1-202ENST00000463440 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
COL1A1-202ENST00000463440 PPP1R14DQ9NXH3 145 aa11.69□□□□□ -0.54
COL1A1-202ENST00000463440 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 MPC2O95563 127 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 HBE1P02100 147 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
COL1A1-202ENST00000463440 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 RHOBP62745 196 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 CLINT1Q14677 625 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 GUK1Q16774 197 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 C1orf158Q8N1D5 194 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 THAP6Q8TBB0 222 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 CELA1Q9UNI1 258 aa11.68□□□□□ -0.54
COL1A1-202ENST00000463440 BOLA2-SMG1P6H3BVE0 249 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 M0R2Z0 102 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 PTTG1O95997 202 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 INSP01308 110 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 EMP1P54849 157 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 TCTAP57738 103 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 SPINK13Q1W4C9 94 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 Q6ZTC4 211 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 RNF126Q9BV68 326 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 KCNIP2Q9NS61 270 aa11.67□□□□□ -0.54
COL1A1-202ENST00000463440 PLECQ15149 4684 aaKnown RBP11.67□□□□□ -0.54
COL1A1-202ENST00000463440 H3BQ15 152 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 H3BTX0 84 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 SLC17A3O00476 420 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 RRN3P1Q2M238 152 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
COL1A1-202ENST00000463440 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 IGLL5B9A064 214 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 C17orf112F2Z3M2 114 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 ZNF253O75346 499 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 OR10J6PQ8NGY7 276 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 SAT2Q96F10 170 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-202ENST00000463440 ATP5SQ99766 215 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
COL1A1-202ENST00000463440 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 HSPB11Q9Y547 144 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 ALG5Q9Y673 324 aa11.65□□□□□ -0.54
COL1A1-202ENST00000463440 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-202ENST00000463440 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
COL1A1-202ENST00000463440 LGALS9CQ6DKI2 356 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 BAP18Q8IXM2 172 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 MBD2Q9UBB5 411 aa11.64□□□□□ -0.55
COL1A1-202ENST00000463440 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
COL1A1-202ENST00000463440 DEFB131BA0A096LNP1 70 aa11.63□□□□□ -0.55
COL1A1-202ENST00000463440 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms