RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 FAM24BQ8N5W8 94 aa10.38□□□□□ -0.75
PHACTR4-203ENST00000463428 TRBV19A0A075B6N1 114 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 MAP1LC3B2A6NCE7 125 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 H3BTX0 84 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 NDUFB4O95168 129 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 CXorf1O96002 111 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 OR10J4P0C629 311 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 ATF4P18848 351 aaPredicted RBP10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 GCHFRP30047 84 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 TFPI2P48307 235 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 MEOX2P50222 304 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 FGF8P55075 233 aaPredicted RBP10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 GUCA2BQ16661 112 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 GUK1Q16774 197 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 KPRPQ5T749 579 aaPredicted RBP10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 WFDC3Q8IUB2 231 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 MAP1LC3BQ9GZQ8 125 aa10.37□□□□□ -0.75
PHACTR4-203ENST00000463428 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
PHACTR4-203ENST00000463428 DNASE2O00115 360 aaPredicted RBP10.36□□□□□ -0.75
PHACTR4-203ENST00000463428 SLC17A3O00476 420 aa10.36□□□□□ -0.75
PHACTR4-203ENST00000463428 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
PHACTR4-203ENST00000463428 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
PHACTR4-203ENST00000463428 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 ZNF705EA8MWA4 302 aaPredicted RBP10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 ZNF253O75346 499 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 CD7P09564 240 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 SFT2D1Q8WV19 159 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 ZNF331Q9NQX6 463 aaPredicted RBP10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
PHACTR4-203ENST00000463428 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 ISLRO14498 428 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 IFNA7P01567 189 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 CCL20P78556 96 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 PDE6HQ13956 83 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 Q8N1Y9 231 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 BLNKQ8WV28 456 aa10.34□□□□□ -0.75
PHACTR4-203ENST00000463428 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 PSMB3P49720 205 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 C16orf92Q96LL3 132 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 C20orf173Q96LM9 149 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 NBEAL1Q6ZS30 2694 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 PRR25Q96S07 402 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
PHACTR4-203ENST00000463428 AGRNO00468 2067 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 A0A1B0GV50 99 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 HBE1P02100 147 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 ID1P41134 155 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 RANP62826 216 aaKnown RBP10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 PSG9Q00887 426 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 PSG3Q16557 428 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 Q9H3A6 140 aa10.32□□□□□ -0.76
PHACTR4-203ENST00000463428 NMBP08949 121 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 DEFB131AP59861 70 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 CD81P60033 236 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 PMS2P11Q13670 270 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 IQCF2Q8IXL9 164 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 YTHDF2Q9Y5A9 579 aaKnown RBP10.31□□□□□ -0.76
PHACTR4-203ENST00000463428 A0A1W2PRE2 83 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 DEFB1P60022 68 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 ICAM4Q14773 271 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 ZNF124Q15973 351 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 PSMG4Q5JS54 123 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 LINC00052Q96N35 136 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 CITED4Q96RK1 184 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
PHACTR4-203ENST00000463428 PGPA6NDG6 321 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 OR11H12B2RN74 326 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 GGTLC3B5MD39 225 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 M0R3E3 92 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 GTSCR1Q86UQ5 136 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 APRG1Q8IVJ8 170 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 OTORQ9NRC9 128 aa10.29□□□□□ -0.76
PHACTR4-203ENST00000463428 PRELID1Q9Y255 219 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms