RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CALML5Q9NZT1 146 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 CCDC167Q9P0B6 97 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 UFC1Q9Y3C8 167 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 RIMS1Q86UR5 1692 aaKnown RBP1.95□□□□□ -2.1
USH2A-203ENST00000463147 LMO7Q8WWI1 1683 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 LAMB4A4D0S4 1761 aa1.95□□□□□ -2.1
USH2A-203ENST00000463147 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 PTPRBP23467 1997 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 TAF1LQ8IZX4 1826 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 C3P01024 1663 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 RREB1Q92766 1687 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 ZNF670-ZNF695F2Z2N8 137 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 ARPC5O15511 151 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 OR2T1O43869 369 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 OR2J2O76002 312 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 SIX6O95475 246 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 C8GP07360 202 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 SULT1A3P0DMM9 295 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 SULT1A4P0DMN0 295 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 FGF7P21781 194 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 NFYAP23511 347 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BOP23527 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BBP33778 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 G6PCP35575 357 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 ZNF80P51504 273 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BDP58876 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BCP62807 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 DYNLT1P63172 113 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 GNG3P63215 75 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 DCDP81605 110 aaKnown RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 MRPS10P82664 201 aaKnown RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 MEF2BQ02080 365 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 TSNQ15631 228 aaKnown RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 HMGN3Q15651 99 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST2H2BEQ16778 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 SCGB2B2Q4G0G5 96 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 AKR1C8PQ5T2L2 129 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 BCL2L15Q5TBC7 163 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 EIF5AL1Q6IS14 154 aaKnown RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 ALKAL2Q6UX46 152 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 ZNF705AQ6ZN79 300 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 LHFPL1Q86WI0 220 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 LRRC28Q86X40 367 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 OR2T35Q8NGX2 323 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 OR4C6Q8NH72 309 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BHQ93079 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 S100A13Q99584 98 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BNQ99877 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 HIST1H2BMQ99879 126 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 VPS25Q9BRG1 176 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 SEC11CQ9BY50 192 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 TUBA4BQ9H853 241 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 LAMB2P55268 1798 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 LRP5O75197 1615 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 PLIN4Q96Q06 1357 aa1.94□□□□□ -2.1
USH2A-203ENST00000463147 CICQ96RK0 1608 aaPredicted RBP1.94□□□□□ -2.1
USH2A-203ENST00000463147 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 KDM3BQ7LBC6 1761 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 A0A0D9SG52 128 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 A0A0J9YW62 118 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 C20orf202A1L168 122 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 HMSDA8MTL9 139 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 MCRIP1C9JLW8 97 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 APOC4-APOC2K7ER74 178 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 GPR31O00270 319 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 IFNA21P01568 189 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 IGHV3-7P01780 117 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 C1QAP02745 245 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PPBPP02775 128 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 GZMHP20718 246 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PPIBP23284 216 aaKnown RBP1.93□□□□□ -2.1
USH2A-203ENST00000463147 KDELR1P24390 212 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 DNAJB13P59910 316 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 HSPE1P61604 102 aaKnown RBP1.93□□□□□ -2.1
USH2A-203ENST00000463147 CDK6Q00534 326 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 EMX2Q04743 252 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 RPL18Q07020 188 aaKnown RBP1.93□□□□□ -2.1
USH2A-203ENST00000463147 SURF2Q15527 256 aaPredicted RBP1.93□□□□□ -2.1
USH2A-203ENST00000463147 PYY3Q5JQD4 70 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 SPANXN3Q5MJ09 141 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 NCMAPQ5T1S8 102 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 AGTRAPQ6RW13 159 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 BPIFA4PQ86YQ2 179 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 OR11H6Q8NGC7 330 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 OR13C4Q8NGS5 318 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 OR4K15Q8NH41 348 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 LCN9Q8WX39 176 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 ARL11Q969Q4 196 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 MALSU1Q96EH3 234 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 GPER1Q99527 375 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 MRPL57Q9BQC6 102 aaKnown RBP1.93□□□□□ -2.1
USH2A-203ENST00000463147 AIF1LQ9BQI0 150 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 GINS3Q9BRX5 216 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PBDC1Q9BVG4 233 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 DDA1Q9BW61 102 aa1.93□□□□□ -2.1
USH2A-203ENST00000463147 PRO1933Q9H354 126 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms