RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF785A8K8V0 405 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF253O75346 499 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 CD33P20138 364 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MEOX2P50222 304 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 RAB14P61106 215 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 PDE6HQ13956 83 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MCRIP2Q9BUT9 160 aaKnown RBP10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MS4A6AQ9H2W1 248 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 H3BTX0 84 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 K7EQG2 157 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 SLC17A3O00476 420 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF331Q9NQX6 463 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ARL2-SNX15V9GYD0 113 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 NOTCH3Q9UM47 2321 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 A0A1W2PRE2 83 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 FAM74A7A6NL05 159 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 IGLL1P15814 213 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 PPT1P50897 306 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 PRR31Q5SQ13 230 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 BLNKQ8WV28 456 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 MED9Q9NWA0 146 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
COL6A1-202ENST00000463060 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
COL6A1-202ENST00000463060 CCDC28AQ8IWP9 274 aa10.74□□□□□ -0.69
COL6A1-202ENST00000463060 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
COL6A1-202ENST00000463060 GNG13Q9P2W3 67 aa10.74□□□□□ -0.69
COL6A1-202ENST00000463060 IGKV3-7A0A075B6H7 116 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 ISLRO14498 428 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 PAGE4O60829 102 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 RANP62826 216 aaKnown RBP10.73□□□□□ -0.69
COL6A1-202ENST00000463060 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
COL6A1-202ENST00000463060 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 Q9H3A6 140 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 SORL1Q92673 2214 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 BCL2P10415 239 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 UBE2G2P60604 165 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
COL6A1-202ENST00000463060 PAFAH1B2P68402 229 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 PSG9Q00887 426 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 OTORQ9NRC9 128 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 LOC102723971A0A1B0GUV8 181 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 PGPA6NDG6 321 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ICAM4Q14773 271 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 PSG3Q16557 428 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 HAGHQ16775 308 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 RARRES2Q99969 163 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 IFNA1P01562 189 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 ATP5G3P48201 142 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 TFPI2P48307 235 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 CD81P60033 236 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 SRSF3P84103 164 aaKnown RBP10.7□□□□□ -0.7
COL6A1-202ENST00000463060 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
COL6A1-202ENST00000463060 PRELID1Q9Y255 219 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 DNAH3Q8TD57 4116 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 RAB19A4D1S5 217 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 M0R3E3 92 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
COL6A1-202ENST00000463060 ID1P41134 155 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
COL6A1-202ENST00000463060 EGFEM1PQ0D2K5 195 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms