RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
RPRD1B-203ENST00000462548 SMIM7Q9BQ49 75 aa11.52□□□□□ -0.57
RPRD1B-203ENST00000462548 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 CRYBB3P26998 211 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 PKIAP61925 76 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 HIST2H2BDQ6DRA6 164 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 KLHDC1Q8N7A1 406 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 ZNF418Q8TF45 676 aaPredicted RBP11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 PEF1Q9UBV8 284 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 FN1P02751 2386 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 NSD1Q96L73 2696 aaPredicted RBP11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 IGHV3-49A0A0A0MS15 119 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 IGHV3-66A0A0C4DH42 116 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 M0R036 132 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 HOXA5P20719 270 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 TCTEX1D4Q5JR98 221 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 NIPSNAP3BQ9BS92 247 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
RPRD1B-203ENST00000462548 S100A2P29034 98 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 ATG101Q9BSB4 218 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 CYSRT1A8MQ03 144 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 SLC17A3O00476 420 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 NDUFA4O00483 81 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 BUB3O43684 328 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 TVP23CQ96ET8 276 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 U3KQE9 123 aa11.5□□□□□ -0.57
RPRD1B-203ENST00000462548 C7orf77A4D0Y5 90 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 GGCTO75223 188 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 CDX1P47902 265 aaPredicted RBP11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 PGPA6NDG6 321 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 TSTD3H0UI37 97 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 GNG5P63218 68 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 OR4F17Q8NGA8 305 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 Q9H3A6 140 aa11.49□□□□□ -0.57
RPRD1B-203ENST00000462548 RAB4AP20338 218 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 UBE2E2Q96LR5 201 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 METTL26Q96S19 204 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 NAT8Q9UHE5 227 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 TMEM241Q24JQ0 296 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 TMEM190Q8WZ59 177 aa11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
RPRD1B-203ENST00000462548 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 EDN2P20800 178 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 RPL23P62829 140 aaKnown RBP11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 AURKAIP1Q9NWT8 199 aaPredicted RBP11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 ZNF320A2RRD8 509 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 EREGO14944 169 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 RPL7P18124 248 aaKnown RBP11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 COTL1Q14019 142 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 FAM24BQ8N5W8 94 aa11.47□□□□□ -0.57
RPRD1B-203ENST00000462548 IGHV4OR15-8A0A075B7B6 117 aa11.46□□□□□ -0.57
RPRD1B-203ENST00000462548 A0A087WW49 117 aa11.46□□□□□ -0.57
RPRD1B-203ENST00000462548 SLC25A5P05141 298 aaKnown RBP11.46□□□□□ -0.57
RPRD1B-203ENST00000462548 LINC01006Q8NI28 216 aa11.46□□□□□ -0.57
RPRD1B-203ENST00000462548 PEX7O00628 323 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 NDUFA6P56556 154 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 TM4SF20Q53R12 229 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 C16orf95Q9H693 158 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 OTORQ9NRC9 128 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 EPDR1Q9UM22 224 aa11.46□□□□□ -0.58
RPRD1B-203ENST00000462548 RHEBQ15382 184 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 ADIRFQ15847 76 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 RPH3ALQ9UNE2 315 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 F8P00451 2351 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 TRAV34A0A0B4J273 112 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 DEFB136Q30KP8 78 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 GPHB5Q86YW7 130 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
RPRD1B-203ENST00000462548 HELTA6NFD8 242 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 LINC01551Q86U37 167 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 C5orf17Q8NAS9 161 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 RNF24Q9Y225 148 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 SETD2Q9BYW2 2564 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 S100A7P31151 101 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 RPEL1Q2QD12 228 aa11.44□□□□□ -0.58
RPRD1B-203ENST00000462548 CENPWQ5EE01 88 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms