RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RPP25LQ8N5L8 163 aaKnown RBP8.74□□□□□ -1.01
CPNE1-221ENST00000462352 LRRC20Q8TCA0 184 aa8.74□□□□□ -1.01
CPNE1-221ENST00000462352 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
CPNE1-221ENST00000462352 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
CPNE1-221ENST00000462352 TPT1P13693 172 aaKnown RBP8.73□□□□□ -1.01
CPNE1-221ENST00000462352 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-221ENST00000462352 TAS2R45P59539 299 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 EIF5AP63241 154 aaKnown RBP8.73□□□□□ -1.01
CPNE1-221ENST00000462352 GUK1Q16774 197 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 KHDC3LQ587J8 217 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 TMEM41BQ5BJD5 291 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 LINC00322Q6ZN03 302 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-221ENST00000462352 BAP18Q8IXM2 172 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 ZNF503Q96F45 646 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 LINC00052Q96N35 136 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 PAXXQ9BUH6 204 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 OR51M1Q9H341 326 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 RPRMQ9NS64 109 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 ZNF586Q9NXT0 402 aa8.73□□□□□ -1.01
CPNE1-221ENST00000462352 TRBV19A0A075B6N1 114 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 RBMY1BA6NDE4 496 aaKnown RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 RBMY1EA6NEQ0 496 aaKnown RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 SLC17A3O00476 420 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 OR7C2O60412 319 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 OR10J4P0C629 311 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 RBMY1DP0C7P1 496 aaKnown RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 SEC11BP0C7V7 166 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 HLA-DMBP28068 263 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 AKR1C8PQ5T2L2 129 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 FXYD5Q96DB9 178 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 SAT2Q96F10 170 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 B9D2Q9BPU9 175 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 SLC50A1Q9BRV3 221 aa8.72□□□□□ -1.01
CPNE1-221ENST00000462352 ZNF331Q9NQX6 463 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-221ENST00000462352 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-221ENST00000462352 KNCNA6PVL3 124 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 HMGB3O15347 200 aaKnown RBP8.71□□□□□ -1.02
CPNE1-221ENST00000462352 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 C4BPBP20851 252 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 DEFB1P60022 68 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 UBE2L3P68036 154 aaKnown RBP8.71□□□□□ -1.02
CPNE1-221ENST00000462352 PDE6HQ13956 83 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 PSG3Q16557 428 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 ACTL10Q5JWF8 245 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 SLC51BQ86UW2 128 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 BLNKQ8WV28 456 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 RNF141Q8WVD5 230 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 RAB24Q969Q5 203 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 ACTR3CQ9C0K3 210 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-221ENST00000462352 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF253O75346 499 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 NDUFB4O95168 129 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 NBEAP1P0C6P0 100 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 PQLC2Q6ZP29 291 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 SBSPONQ8IVN8 264 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 STHQ8IWL8 128 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 TMED6Q8WW62 240 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 ASCL2Q99929 193 aa8.7□□□□□ -1.02
CPNE1-221ENST00000462352 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-221ENST00000462352 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 F6UB75 175 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 PSG9Q00887 426 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 HAGHQ16775 308 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 TRPT1Q86TN4 253 aaKnown RBP8.69□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF738Q8NE65 137 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 PHYHIPLQ96FC7 376 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 CLEC5AQ9NY25 188 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 DNAH9Q9NYC9 4486 aa8.69□□□□□ -1.02
CPNE1-221ENST00000462352 A0A0J9YX75 114 aa8.68□□□□□ -1.02
CPNE1-221ENST00000462352 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
CPNE1-221ENST00000462352 UMAD1C9J7I0 102 aa8.68□□□□□ -1.02
CPNE1-221ENST00000462352 H3BMM0 161 aa8.68□□□□□ -1.02
CPNE1-221ENST00000462352 FHITP49789 147 aa8.68□□□□□ -1.02
CPNE1-221ENST00000462352 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
CPNE1-221ENST00000462352 KIR2DL5BA0A0G2JN68 375 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 KIR2DL5BA0A0G2JPC4 375 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 CXorf1O96002 111 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 PRB4P10163 310 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-221ENST00000462352 GCHFRP30047 84 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 APOC4P55056 127 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
CPNE1-221ENST00000462352 EIF5AL1Q6IS14 154 aaKnown RBP8.67□□□□□ -1.02
CPNE1-221ENST00000462352 KIR2DL5AQ8N109 375 aa8.67□□□□□ -1.02
CPNE1-221ENST00000462352 EXOC3-AS1Q8N2X6 119 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms