RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZMAT5Q9UDW3 170 aaKnown RBP8.08□□□□□ -1.12
RTF1-202ENST00000462276 IGHV3OR16-13A0A075B7E8 117 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 IGHV3-49A0A0A0MS15 119 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 IGHV3-74A0A0B4J1X5 117 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 IGHV3-66A0A0C4DH42 116 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
RTF1-202ENST00000462276 CD33P20138 364 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 CMC4P56277 68 aaPredicted RBP8.07□□□□□ -1.12
RTF1-202ENST00000462276 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
RTF1-202ENST00000462276 ADAMTSL5Q6ZMM2 481 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 ZNF503Q96F45 646 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
RTF1-202ENST00000462276 SLC50A1Q9BRV3 221 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 SMDT1Q9H4I9 107 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 MLXQ9UH92 298 aa8.07□□□□□ -1.12
RTF1-202ENST00000462276 NOTCH3Q9UM47 2321 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 H3BQ15 152 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 DNASE2O00115 360 aaPredicted RBP8.06□□□□□ -1.12
RTF1-202ENST00000462276 ISLRO14498 428 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 WIPF1O43516 503 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 SAP30O75446 220 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 IGLV1-51P01701 117 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 OR10J4P0C629 311 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 PYYP10082 97 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 ID1P41134 155 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 FGF8P55075 233 aaPredicted RBP8.06□□□□□ -1.12
RTF1-202ENST00000462276 PRR31Q5SQ13 230 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 LCN12Q6JVE5 192 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 IQCF2Q8IXL9 164 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 ZNF586Q9NXT0 402 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 PRELID1Q9Y255 219 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 SMAD5-AS1Q9Y6J3 95 aa8.06□□□□□ -1.12
RTF1-202ENST00000462276 RAB19A4D1S5 217 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 OR4C46A6NHA9 309 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 SNRPD3P62318 126 aaKnown RBP8.05□□□□□ -1.12
RTF1-202ENST00000462276 CCL20P78556 96 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 CD300EQ496F6 205 aaPredicted RBP8.05□□□□□ -1.12
RTF1-202ENST00000462276 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 MRPL53Q96EL3 112 aaKnown RBP8.05□□□□□ -1.12
RTF1-202ENST00000462276 ZNF331Q9NQX6 463 aaPredicted RBP8.05□□□□□ -1.12
RTF1-202ENST00000462276 OTORQ9NRC9 128 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 GNG13Q9P2W3 67 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 VAX2Q9UIW0 290 aa8.05□□□□□ -1.12
RTF1-202ENST00000462276 LINC00862A6NCI5 91 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 F6UZH7 168 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 BCL2P10415 239 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 RANP62826 216 aaKnown RBP8.04□□□□□ -1.12
RTF1-202ENST00000462276 PEA15Q15121 130 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 NDUFA5Q16718 116 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 TMEM61Q8N0U2 210 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 BLNKQ8WV28 456 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 FAM210AQ96ND0 272 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 MS4A6AQ9H2W1 248 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
RTF1-202ENST00000462276 SERTM2A0A1B0GWG4 89 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 RBFOX3A6NFN3 312 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 FAM74A7A6NL05 159 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 K7EQG2 157 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 PDE6DO43924 150 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 PAGE4O60829 102 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTF1-202ENST00000462276 NDUFB4O95168 129 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 CSN1S1P47710 185 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 ZNF506Q5JVG8 444 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 CST9LP1Q5W188 147 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 CMTM2Q8TAZ6 248 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 DCANP1Q8TF63 244 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 HIST1H2BAQ96A08 127 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
RTF1-202ENST00000462276 Q9H3A6 140 aa8.03□□□□□ -1.12
RTF1-202ENST00000462276 VWFP04275 2813 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 A0A1B0GV50 99 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 PGPA6NDG6 321 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
RTF1-202ENST00000462276 C11orf94C9JXX5 98 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 SOCS3O14543 225 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 EDN2P20800 178 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 SUMO1P63165 101 aaKnown RBP8.02□□□□□ -1.13
RTF1-202ENST00000462276 MEF2BQ02080 365 aaPredicted RBP8.02□□□□□ -1.13
RTF1-202ENST00000462276 UQCC3Q6UW78 93 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
RTF1-202ENST00000462276 C17orf77Q96MU5 243 aa8.02□□□□□ -1.13
RTF1-202ENST00000462276 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
RTF1-202ENST00000462276 LOC102723971A0A1B0GUV8 181 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 TMEM250H0YL14 139 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 K7EQM0 130 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
RTF1-202ENST00000462276 UBE2G2P60604 165 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 ICAM4Q14773 271 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 PSG3Q16557 428 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 GUCA2BQ16661 112 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 HAGHQ16775 308 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 CCDC28AQ8IWP9 274 aa8.01□□□□□ -1.13
RTF1-202ENST00000462276 PCNPQ8WW12 178 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms