RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 FRZBQ92765 325 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.38□□□□□ -1.07
IFT88-204ENST00000461115 A0A1W2PPQ1 181 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 C19orf71A6NCJ1 209 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 FBLL1A6NHQ2 334 aaKnown RBP8.38□□□□□ -1.07
IFT88-204ENST00000461115 IGHV3-23P01764 117 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 HOXA5P20719 270 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 SNRPEP62304 92 aaKnown RBP8.38□□□□□ -1.07
IFT88-204ENST00000461115 RPEL1Q2QD12 228 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 CT83Q5H943 113 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 IBA57Q5T440 356 aaKnown RBP8.38□□□□□ -1.07
IFT88-204ENST00000461115 CYB5R2Q6BCY4 276 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 C16orf54Q6UWD8 224 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 Q96MF0 132 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 SMAD5-AS1Q9Y6J3 95 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 SVEP1Q4LDE5 3571 aa8.38□□□□□ -1.07
IFT88-204ENST00000461115 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 IGHG4P01861 327 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 TRGV3P03979 118 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 S100A6P06703 90 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 MEOX2P50222 304 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 UBE2G1P62253 170 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 COX19Q49B96 90 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 CLEC19AQ6UXS0 136 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 Q86TA4 180 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 TEX29Q8N6K0 151 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 ZFP30Q9Y2G7 519 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
IFT88-204ENST00000461115 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 SLC17A3O00476 420 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 NDUFA4O00483 81 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 GHRHP01286 108 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 HNF1AP20823 631 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 Q6ZS46 218 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 EXOC3-AS1Q8N2X6 119 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 CMTM2Q8TAZ6 248 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 MS4A10Q96PG2 267 aa8.37□□□□□ -1.07
IFT88-204ENST00000461115 RNASE7Q9H1E1 156 aaKnown RBP8.37□□□□□ -1.07
IFT88-204ENST00000461115 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
IFT88-204ENST00000461115 A0A0G2JLM5 398 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 ZNF785A8K8V0 405 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 H3BTX0 84 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 SNRPCP09234 159 aaKnown RBP8.36□□□□□ -1.07
IFT88-204ENST00000461115 PSMB8P28062 276 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 FABP9Q0Z7S8 132 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 PSG3Q16557 428 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 SMUG1Q53HV7 270 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 OR8I2Q8N0Y5 310 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 Q8N2B8 174 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 MAPK1IP1LQ8NDC0 245 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 MYOZ3Q8TDC0 251 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 GRAMD2BQ96HH9 432 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 NOL4LQ96MY1 436 aaPredicted RBP8.36□□□□□ -1.07
IFT88-204ENST00000461115 FOXC2Q99958 501 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 AAMDCQ9H7C9 122 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 ZNF331Q9NQX6 463 aaPredicted RBP8.36□□□□□ -1.07
IFT88-204ENST00000461115 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
IFT88-204ENST00000461115 NBPF19A0A087WUL8 3843 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 K7EQM0 130 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 S100A8P05109 93 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 ARL3P36405 182 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 CDX1P47902 265 aaPredicted RBP8.35□□□□□ -1.07
IFT88-204ENST00000461115 TPPP2P59282 170 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 RPL19P84098 196 aaKnown RBP8.35□□□□□ -1.07
IFT88-204ENST00000461115 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 TMEM86BQ8N661 226 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 OR4B1Q8NGF8 309 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 WIPF2Q8TF74 440 aaPredicted RBP8.35□□□□□ -1.07
IFT88-204ENST00000461115 MRPL53Q96EL3 112 aaKnown RBP8.35□□□□□ -1.07
IFT88-204ENST00000461115 METTL26Q96S19 204 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 GNB1LQ9BYB4 327 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 LINC00527Q9UJ94 153 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
IFT88-204ENST00000461115 ZFHX3Q15911 3703 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 ITPR3Q14573 2671 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 RBAKDNA6NC62 111 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 IZUMO1RA6ND01 250 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 GATCO43716 136 aaKnown RBP8.34□□□□□ -1.07
IFT88-204ENST00000461115 MT-ND6P03923 174 aa8.34□□□□□ -1.07
IFT88-204ENST00000461115 MGST1P10620 155 aaKnown RBP8.34□□□□□ -1.07
IFT88-204ENST00000461115 FOXA3P55318 350 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms