RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 ATRQ13535 2644 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 NPIPB5A8MRT5 1133 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 SNAI2O43623 268 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 TRGV3P03979 118 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 PPIFP30405 207 aaKnown RBP9.31□□□□□ -0.92
NPHP4-204ENST00000460696 ZNF138P52744 262 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-204ENST00000460696 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 PRDM13Q9H4Q3 707 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 F2Z2F3 143 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 GPX1P07203 203 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 HTN1P15515 57 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 YPEL3P61236 119 aaPredicted RBP9.31□□□□□ -0.92
NPHP4-204ENST00000460696 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 OR10AG1Q8NH19 301 aa9.31□□□□□ -0.92
NPHP4-204ENST00000460696 ADAMTS20P59510 1910 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
NPHP4-204ENST00000460696 C22orf46C9J442 243 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
NPHP4-204ENST00000460696 NMUP48645 174 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 PDLIM4P50479 330 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 ADORA2A-AS1P86434 159 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 C1orf194Q5T5A4 169 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 CYB5R2Q6BCY4 276 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 EEF1AKMT3Q96AZ1 226 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 PIMREGQ9BSJ6 248 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 TCF21O43680 179 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 MGPP08493 103 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 FRMD6-AS1P0C7T7 363 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 KAAG1Q9UBP8 84 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 GOLT1BQ9Y3E0 138 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 NUPR1O60356 82 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 PRTN3P24158 256 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 Q8TAT8 98 aa9.3□□□□□ -0.92
NPHP4-204ENST00000460696 MRPL36Q9P0J6 103 aaKnown RBP9.3□□□□□ -0.92
NPHP4-204ENST00000460696 A8MWP6 167 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 LINC00614P0C842 121 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 BEND2Q8NDZ0 799 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 PRELID3AQ96N28 172 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 SLAQ13239 276 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 POLR3KQ9Y2Y1 108 aaPredicted RBP9.29□□□□□ -0.92
NPHP4-204ENST00000460696 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 ITLN2Q8WWU7 325 aaPredicted RBP9.29□□□□□ -0.92
NPHP4-204ENST00000460696 RNF5Q99942 180 aa9.29□□□□□ -0.92
NPHP4-204ENST00000460696 Q6ZWC4 215 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 MCRIP2Q9BUT9 160 aaKnown RBP9.28□□□□□ -0.92
NPHP4-204ENST00000460696 BPESC1Q9GZL8 116 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 SOX21Q9Y651 276 aaPredicted RBP9.28□□□□□ -0.92
NPHP4-204ENST00000460696 A0A1W2PS18 150 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 C19orf84I3L1E1 186 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 PATE2Q6UY27 113 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
NPHP4-204ENST00000460696 TDGF1P3P51864 188 aa9.27□□□□□ -0.92
NPHP4-204ENST00000460696 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.92
NPHP4-204ENST00000460696 ANKRD17O75179 2603 aaKnown RBP9.27□□□□□ -0.93
NPHP4-204ENST00000460696 TOMM40O96008 361 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 TRAV40A0A0B4J280 105 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 EREGO14944 169 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 RAB9AP51151 201 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 RPS20P60866 119 aaKnown RBP9.27□□□□□ -0.93
NPHP4-204ENST00000460696 TM4SF20Q53R12 229 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 Q5PR19 223 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
NPHP4-204ENST00000460696 A6NNC1 897 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 Q0VG73 95 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 ZNF841Q6ZN19 808 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 ERASQ7Z444 233 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 MAP1LC3AQ9H492 121 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 MYO15AQ9UKN7 3530 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 NDUFB8O95169 186 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 PLA2G2AP14555 144 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 EFNA4P52798 201 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 Q86TA4 180 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 Q96MF0 132 aa9.26□□□□□ -0.93
NPHP4-204ENST00000460696 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms