RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SLC25A2Q9BXI2 301 aa16.63■□□□□ 0.25
C9orf3-209ENST00000460573 BOLA1Q9Y3E2 137 aa16.63■□□□□ 0.25
C9orf3-209ENST00000460573 A0A1W2PPV4 95 aa16.62■□□□□ 0.25
C9orf3-209ENST00000460573 RBMY1BA6NDE4 496 aaKnown RBP16.62■□□□□ 0.25
C9orf3-209ENST00000460573 RBMY1EA6NEQ0 496 aaKnown RBP16.62■□□□□ 0.25
C9orf3-209ENST00000460573 RBMY1DP0C7P1 496 aaKnown RBP16.62■□□□□ 0.25
C9orf3-209ENST00000460573 SPATA31B1PQ5VZV4 182 aa16.62■□□□□ 0.25
C9orf3-209ENST00000460573 FAM167A-AS1Q96KT0 104 aa16.62■□□□□ 0.25
C9orf3-209ENST00000460573 SLC50A1Q9BRV3 221 aa16.62■□□□□ 0.25
C9orf3-209ENST00000460573 CLEC5AQ9NY25 188 aa16.62■□□□□ 0.25
C9orf3-209ENST00000460573 ZNF253O75346 499 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 HIST1H1EP10412 219 aaKnown RBP16.61■□□□□ 0.25
C9orf3-209ENST00000460573 KHDC3LQ587J8 217 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 LINC00052Q96N35 136 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 ZNF471Q9BX82 626 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-209ENST00000460573 SH3BGRL3Q9H299 93 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 OR51M1Q9H341 326 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
C9orf3-209ENST00000460573 RAB2AP61019 212 aa16.6■□□□□ 0.25
C9orf3-209ENST00000460573 ZNF124Q15973 351 aa16.6■□□□□ 0.25
C9orf3-209ENST00000460573 SLC51BQ86UW2 128 aa16.6■□□□□ 0.25
C9orf3-209ENST00000460573 STHQ8IWL8 128 aa16.6■□□□□ 0.25
C9orf3-209ENST00000460573 ZMAT4Q9H898 229 aa16.6■□□□□ 0.25
C9orf3-209ENST00000460573 ZNF331Q9NQX6 463 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-209ENST00000460573 COL7A1Q02388 2944 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 TRAV8-2A0A0B4J237 113 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 KIR2DL5BA0A0G2JN68 375 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 KIR2DL5BA0A0G2JPC4 375 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 H3BQ15 152 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 SPP1P10451 314 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 APOC4P55056 127 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 PDE6HQ13956 83 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 TMEM41BQ5BJD5 291 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 SBSPONQ8IVN8 264 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 KIR2DL5AQ8N109 375 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 KIR2DL5BQ8NHK3 375 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 PAXXQ9BUH6 204 aa16.59■□□□□ 0.25
C9orf3-209ENST00000460573 TRBV19A0A075B6N1 114 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 RGS13O14921 159 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 OR7C2O60412 319 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 CDC34P49427 236 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-209ENST00000460573 HAGHQ16775 308 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 FAM122CQ6P4D5 195 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 FOXI2Q6ZQN5 318 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 SAT2Q96F10 170 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-209ENST00000460573 ZNF586Q9NXT0 402 aa16.58■□□□□ 0.24
C9orf3-209ENST00000460573 SEC11BP0C7V7 166 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 PYYP10082 97 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 AKR1C8PQ5T2L2 129 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 PQLC2Q6ZP29 291 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 ZNF767PQ75MW2 155 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 RPP25LQ8N5L8 163 aaKnown RBP16.57■□□□□ 0.24
C9orf3-209ENST00000460573 RNF141Q8WVD5 230 aa16.57■□□□□ 0.24
C9orf3-209ENST00000460573 ACTR3CQ9C0K3 210 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-209ENST00000460573 SAV1Q9H4B6 383 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-209ENST00000460573 KNCNA6PVL3 124 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 UBE2CO00762 179 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 NBEAP1P0C6P0 100 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 TPT1P13693 172 aaKnown RBP16.56■□□□□ 0.24
C9orf3-209ENST00000460573 PSG9Q00887 426 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 IFITM2Q01629 132 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 PSG3Q16557 428 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 ACTL10Q5JWF8 245 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 EBLN2Q6P2I7 272 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 BAP18Q8IXM2 172 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 C20orf173Q96LM9 149 aa16.56■□□□□ 0.24
C9orf3-209ENST00000460573 SNRPCP09234 159 aaKnown RBP16.55■□□□□ 0.24
C9orf3-209ENST00000460573 HLA-DRB4P13762 266 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 RPL35AP18077 110 aaKnown RBP16.55■□□□□ 0.24
C9orf3-209ENST00000460573 TRPT1Q86TN4 253 aaKnown RBP16.55■□□□□ 0.24
C9orf3-209ENST00000460573 STOML3Q8TAV4 291 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 RAB24Q969Q5 203 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 FXYD5Q96DB9 178 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 RCHY1Q96PM5 261 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 HLA-DRB4X5D2U9 266 aa16.55■□□□□ 0.24
C9orf3-209ENST00000460573 H3BMM0 161 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 H3BTX0 84 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 SLC17A3O00476 420 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 IFNA7P01567 189 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 STAG3L2P0CL84 134 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 STAG3L3P0CL85 134 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 IGFL4Q6B9Z1 124 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 MORN3Q6PF18 240 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-209ENST00000460573 TEX261Q6UWH6 196 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 RNF182Q8N6D2 247 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 ZNF738Q8NE65 137 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 ZNF503Q96F45 646 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 CLUHP3Q96NS8 147 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 TM2D3Q9BRN9 247 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 CSTL1Q9H114 145 aa16.54■□□□□ 0.24
C9orf3-209ENST00000460573 A0A0J9YX75 114 aa16.53■□□□□ 0.24
C9orf3-209ENST00000460573 OR10J4P0C629 311 aa16.53■□□□□ 0.24
C9orf3-209ENST00000460573 UBE2L3P68036 154 aaKnown RBP16.53■□□□□ 0.24
C9orf3-209ENST00000460573 BLNKQ8WV28 456 aa16.53■□□□□ 0.24
C9orf3-209ENST00000460573 SPATA25Q9BR10 227 aa16.53■□□□□ 0.24
C9orf3-209ENST00000460573 PRELID1Q9Y255 219 aa16.53■□□□□ 0.24
C9orf3-209ENST00000460573 UMAD1C9J7I0 102 aa16.52■□□□□ 0.24
C9orf3-209ENST00000460573 NDUFB4O95168 129 aa16.52■□□□□ 0.24
C9orf3-209ENST00000460573 NUTF2P61970 127 aaKnown RBP16.52■□□□□ 0.24
C9orf3-209ENST00000460573 EIF5AL1Q6IS14 154 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms