RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 TMEM183AQ8IXX5 376 aa13.15□□□□□ -0.3
YIPF3-205ENST00000460547 ATP6V0BQ99437 205 aa13.15□□□□□ -0.3
YIPF3-205ENST00000460547 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
YIPF3-205ENST00000460547 OR2T8A6NH00 312 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 AMY1AP04745 511 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 ADMP35318 185 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 C15orf32Q32M92 178 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 COX19Q49B96 90 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.31
YIPF3-205ENST00000460547 H3BTX0 84 aa13.14□□□□□ -0.31
YIPF3-205ENST00000460547 S100A2P29034 98 aa13.14□□□□□ -0.31
YIPF3-205ENST00000460547 OR8I2Q8N0Y5 310 aa13.14□□□□□ -0.31
YIPF3-205ENST00000460547 NHLRC2Q8NBF2 726 aa13.14□□□□□ -0.31
YIPF3-205ENST00000460547 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
YIPF3-205ENST00000460547 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
YIPF3-205ENST00000460547 Q86TA4 180 aa13.13□□□□□ -0.31
YIPF3-205ENST00000460547 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
YIPF3-205ENST00000460547 CMTM2Q8TAZ6 248 aa13.13□□□□□ -0.31
YIPF3-205ENST00000460547 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
YIPF3-205ENST00000460547 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 A6NDX4 124 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
YIPF3-205ENST00000460547 G3V318 75 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 M0QZK8 103 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 BMPR1BO00238 502 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
YIPF3-205ENST00000460547 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 MT-ND6P03923 174 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
YIPF3-205ENST00000460547 TEX29Q8N6K0 151 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 GRAMD2BQ96HH9 432 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 GNB1LQ9BYB4 327 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 ANK3Q12955 4377 aaKnown RBP13.12□□□□□ -0.31
YIPF3-205ENST00000460547 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 TRBV7-1A0A0A6YYK4 115 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 TRAV41A0A0B4J266 112 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 BRI3O95415 125 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 IGF1P05019 195 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 WDR73Q6P4I2 378 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
YIPF3-205ENST00000460547 EXOC3-AS1Q8N2X6 119 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 NUDT10Q8NFP7 164 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 NUDT11Q96G61 164 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
YIPF3-205ENST00000460547 FAM223BA6NKX1 122 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 GPR183P32249 361 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 CT83Q5H943 113 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 FAM223AQ8IWN6 122 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 TMEM75Q8N9X5 138 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
YIPF3-205ENST00000460547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.318e-8■■□□□ 11.7
YIPF3-205ENST00000460547 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 SH2D7A6NKC9 451 aaPredicted RBP13.1□□□□□ -0.31
YIPF3-205ENST00000460547 J3QLI3 93 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 ZNF253O75346 499 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 CBLN1P23435 193 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 RAB9AP51151 201 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 RASL11AQ6T310 242 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 C17orf77Q96MU5 243 aa13.1□□□□□ -0.31
YIPF3-205ENST00000460547 SERTM2A0A1B0GWG4 89 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 C19orf71A6NCJ1 209 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 K7EQM0 130 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 TSKUQ8WUA8 353 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 HIST1H2BLQ99880 126 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
YIPF3-205ENST00000460547 MRPL18Q9H0U6 180 aaKnown RBP13.09□□□□□ -0.31
YIPF3-205ENST00000460547 H3BUA1 57 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 H3BUX3 64 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 IGHG2P01859 326 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 IER3P46695 156 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 PSG9Q00887 426 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 SCGB2A2Q13296 93 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.31
YIPF3-205ENST00000460547 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.31
YIPF3-205ENST00000460547 CLEC3BP05452 202 aa13.08□□□□□ -0.32
YIPF3-205ENST00000460547 TCL1AP56279 114 aa13.08□□□□□ -0.32
YIPF3-205ENST00000460547 PRR27Q6MZM9 219 aa13.08□□□□□ -0.32
YIPF3-205ENST00000460547 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
YIPF3-205ENST00000460547 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
YIPF3-205ENST00000460547 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.32
YIPF3-205ENST00000460547 SNURFLB1AK76 121 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 AVPP01185 164 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
YIPF3-205ENST00000460547 NAT8BQ9UHF3 227 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms