RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 GCHFRP30047 84 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 CSN1S1P47710 185 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 WFDC3Q8IUB2 231 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 GBGT1Q8N5D6 347 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 ZNF680Q8NEM1 530 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 RXFP4Q8TDU9 374 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 ARL2-SNX15V9GYD0 113 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 TRBV19A0A075B6N1 114 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 OR11H12B2RN74 326 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 K7EQG2 157 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 TFPI2P48307 235 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 EGFEM1PQ0D2K5 195 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 SAMD5Q5TGI4 173 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 MORN5Q5VZ52 161 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
HDAC4-206ENST00000460235 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 TCEAL7Q9BRU2 100 aa9.28□□□□□ -0.92
HDAC4-206ENST00000460235 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 F6UZH7 168 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.93
HDAC4-206ENST00000460235 OR10J4P0C629 311 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 PYYP10082 97 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 BEAN1Q3B7T3 259 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 DCANP1Q8TF63 244 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 FXYD5Q96DB9 178 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
HDAC4-206ENST00000460235 K7EQM0 130 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
HDAC4-206ENST00000460235 EDN2P20800 178 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 CD81P60033 236 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 PMS2P11Q13670 270 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 EBLN2Q6P2I7 272 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 LINC00052Q96N35 136 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF331Q9NQX6 463 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-206ENST00000460235 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF586Q9NXT0 402 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
HDAC4-206ENST00000460235 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
HDAC4-206ENST00000460235 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
HDAC4-206ENST00000460235 H3BQ15 152 aa9.25□□□□□ -0.93
HDAC4-206ENST00000460235 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
HDAC4-206ENST00000460235 FHITP49789 147 aa9.25□□□□□ -0.93
HDAC4-206ENST00000460235 RANP62826 216 aaKnown RBP9.25□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF726P1Q15940 193 aa9.25□□□□□ -0.93
HDAC4-206ENST00000460235 PSG3Q16557 428 aa9.25□□□□□ -0.93
HDAC4-206ENST00000460235 IZUMO1RA6ND01 250 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 G3V4G9 280 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF688P0C7X2 276 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 FGF8P55075 233 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-206ENST00000460235 NUTF2P61970 127 aaKnown RBP9.24□□□□□ -0.93
HDAC4-206ENST00000460235 PSMG4Q5JS54 123 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 Q9H3A6 140 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 TUBA4BQ9H853 241 aa9.24□□□□□ -0.93
HDAC4-206ENST00000460235 SORL1Q92673 2214 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 PGPA6NDG6 321 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 SOCS3O14543 225 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 DEFB131AP59861 70 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 ICAM4Q14773 271 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 CST9LP1Q5W188 147 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 FOXI2Q6ZQN5 318 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 ZNF503Q96F45 646 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
HDAC4-206ENST00000460235 SLC25A5P05141 298 aaKnown RBP9.22□□□□□ -0.93
HDAC4-206ENST00000460235 STHQ8IWL8 128 aa9.22□□□□□ -0.93
HDAC4-206ENST00000460235 HIST1H2BAQ96A08 127 aa9.22□□□□□ -0.93
HDAC4-206ENST00000460235 RPUSD4Q96CM3 377 aaKnown RBP9.22□□□□□ -0.93
HDAC4-206ENST00000460235 MAP6D1Q9H9H5 199 aa9.22□□□□□ -0.93
HDAC4-206ENST00000460235 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
HDAC4-206ENST00000460235 GNG13Q9P2W3 67 aa9.22□□□□□ -0.93
HDAC4-206ENST00000460235 A0A1B0GV50 99 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 RBAKDNA6NC62 111 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 NDUFB4O95168 129 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 S100A9P06702 114 aaKnown RBP9.21□□□□□ -0.94
HDAC4-206ENST00000460235 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
HDAC4-206ENST00000460235 SSX7Q7RTT5 188 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 LYPD6BQ8NI32 183 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 VAX2Q9UIW0 290 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.94
HDAC4-206ENST00000460235 FAM74A7A6NL05 159 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 H3BTX0 84 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 SLC17A3O00476 420 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 PDE6DO43924 150 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 PAGE4O60829 102 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 NDUFS6O75380 124 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms