RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
PTPRU-205ENST00000460170 BEX4Q9NWD9 120 aaPredicted RBP11.89□□□□□ -0.51
PTPRU-205ENST00000460170 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
PTPRU-205ENST00000460170 ORAOV1Q8WV07 137 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 SLC25A2Q9BXI2 301 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 BPESC1Q9GZL8 116 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 JKAMPQ9P055 326 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 IGKV3OR2-268A0A0C4DH90 116 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 SYS1-DBNDD2H3BUS1 97 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 APOMO95445 188 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 SAA4P35542 130 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 ALKBH7Q9BT30 221 aaPredicted RBP11.88□□□□□ -0.51
PTPRU-205ENST00000460170 NHP2Q9NX24 153 aaKnown RBP11.88□□□□□ -0.51
PTPRU-205ENST00000460170 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 GNLYP22749 145 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 NDPQ00604 133 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 OBSL1O75147 1896 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
PTPRU-205ENST00000460170 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
PTPRU-205ENST00000460170 C2orf88Q9BSF0 95 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
PTPRU-205ENST00000460170 A6NNC1 897 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
PTPRU-205ENST00000460170 SLX1AQ9BQ83 275 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
PTPRU-205ENST00000460170 DSCR9P59020 149 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 PF4P02776 101 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 SEC11AP67812 179 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 LAGE3Q14657 143 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 MRAP2Q96G30 205 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 VCX2Q9H322 139 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 V9GYV3 84 aa11.87□□□□□ -0.51
PTPRU-205ENST00000460170 hDV102S1A0JD36 115 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 FAM231BA6NCW3 169 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 B4DSR2 109 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-205ENST00000460170 SCGB1A1P11684 91 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 PRR20EP86478 221 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 PRR20CP86479 221 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 PRR20DP86480 221 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 PRR20BP86481 221 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 PRR20AP86496 221 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 CT83Q5H943 113 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 C18orf32Q8TCD1 76 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 LINC00477Q96M19 166 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 HSD52Q0P140 79 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 CHTOPQ9Y3Y2 248 aaKnown RBP11.86□□□□□ -0.51
PTPRU-205ENST00000460170 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
PTPRU-205ENST00000460170 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 A8MWP6 167 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 ZNF124Q15973 351 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 JMJD8Q96S16 334 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 MED13Q9UHV7 2174 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 WT1P19544 449 aaPredicted RBP11.85□□□□□ -0.51
PTPRU-205ENST00000460170 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 EMP1P54849 157 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 TMEM249Q2WGJ8 235 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 FAM231DQ6ZW35 169 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 PLA2G2EQ9NZK7 142 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 DIAPH2-AS1Q14236 149 aa11.85□□□□□ -0.51
PTPRU-205ENST00000460170 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
PTPRU-205ENST00000460170 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 H3BRM9 83 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 FXYD7P58549 80 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 VWC2Q2TAL6 325 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 IGFL2Q6UWQ7 119 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 KAAG1Q9UBP8 84 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 NDUFB8O95169 186 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 TMEM75Q8N9X5 138 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
PTPRU-205ENST00000460170 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 A0A1W2PRX2 142 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 LINC01549A6NIU2 74 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 TDGF1P13385 188 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 UBE2E1P51965 193 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 SELENOKQ9Y6D0 94 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
PTPRU-205ENST00000460170 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
PTPRU-205ENST00000460170 ZNF418Q8TF45 676 aaPredicted RBP11.83□□□□□ -0.52
PTPRU-205ENST00000460170 NDUFS6O75380 124 aaKnown RBP11.83□□□□□ -0.52
PTPRU-205ENST00000460170 PLCE1Q9P212 2302 aa11.83□□□□□ -0.52
PTPRU-205ENST00000460170 C20orf144Q9BQM9 153 aa11.83□□□□□ -0.52
PTPRU-205ENST00000460170 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
PTPRU-205ENST00000460170 MRPL52Q86TS9 123 aaKnown RBP11.83□□□□□ -0.52
PTPRU-205ENST00000460170 FAM110DQ8TAY7 271 aaPredicted RBP11.83□□□□□ -0.52
PTPRU-205ENST00000460170 DLEU1O43261 78 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 OR2K2Q8NGT1 345 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 STHQ8IWL8 128 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms