RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 IGHV2-26A0A0B4J1V2 119 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 RHODO00212 210 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 SIGLEC12Q96PQ1 595 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 APOC4P55056 127 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 C3orf36Q3SXR2 165 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 TMEM126AQ9H061 195 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 NUP210LQ5VU65 1888 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 IGLV3-12A0A075B6K2 115 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 TIMM23O14925 209 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 ADMP35318 185 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 Q5BKY6 102 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 LAIR2Q6ISS4 152 aa7.35□□□□□ -1.23
SHROOM4-203ENST00000460112 LRRK2Q5S007 2527 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 DUTP33316 252 aaKnown RBP7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 MRPL14Q6P1L8 145 aaKnown RBP7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 MUC21A0A140T8X8 626 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 TBX6O95947 436 aaPredicted RBP7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 RPRMLQ8N4K4 120 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 LY6G5BQ8NDX9 201 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 MLNRO43193 412 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 RFPL3SP0C7P2 107 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 PRTN3P24158 256 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 LHFPL1Q86WI0 220 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 A0A1W2PR77 199 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 CD5LO43866 347 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 TMEM258P61165 79 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 CDKN1BP46527 198 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 SUPT4H1P63272 117 aaKnown RBP7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 KIR3DS1Q14943 382 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 EFNB3Q15768 340 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 GFI1BQ5VTD9 330 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 IMMP1LQ96LU5 166 aa7.34□□□□□ -1.23
SHROOM4-203ENST00000460112 C3orf56Q8N813 242 aa7.34□□□□□ -1.24
SHROOM4-203ENST00000460112 SRD5A1P18405 259 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 EVI2AP22794 236 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 TRPT1Q86TN4 253 aaKnown RBP7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 DAZ1Q9NQZ3 744 aaKnown RBP7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 F8W1H4 67 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 LTBRP36941 435 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 FAM219BQ5XKK7 198 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 CD300EQ496F6 205 aaPredicted RBP7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 C9orf106Q8NAJ2 232 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 WFDC6Q9BQY6 131 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 SRRM4A7MD48 611 aaKnown RBP7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 COLCA2A8K830 154 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 SOCS3O14543 225 aa7.33□□□□□ -1.24
SHROOM4-203ENST00000460112 C20orf144Q9BQM9 153 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 NEUROG3Q9Y4Z2 214 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 RAMP3O60896 148 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV2-70P01814 119 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 FOXL2P58012 376 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE2AQ6NT46 116 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 CCL3L1P16619 93 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 AZU1P20160 251 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 ACTL10Q5JWF8 245 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 BTCP35070 178 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 PSG3Q16557 428 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 KLHL30-AS1Q8NEE0 82 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 RFNGQ9Y644 331 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 CELA3AP09093 270 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV1-8P0DP01 117 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 PYY3Q5JQD4 70 aa7.32□□□□□ -1.24
SHROOM4-203ENST00000460112 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 LSM4Q9Y4Z0 139 aaKnown RBP7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV3OR16-8A0A075B7F1 116 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 H3BQ85 93 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 CELA3BP08861 270 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 SELLP14151 372 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 THAP8Q8NA92 274 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 D6R8Y8 96 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV3-64A0A075B6Q5 118 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 LY6G6FQ5SQ64 297 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE12HA6NDE8 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE7O76087 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE12FP0CL80 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE12GP0CL81 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE12IP0CL82 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 GAGE4Q13068 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV1-3A0A0C4DH29 117 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 PRIMA1Q86XR5 153 aa7.31□□□□□ -1.24
SHROOM4-203ENST00000460112 TIAF1O95411 115 aa7.3□□□□□ -1.24
SHROOM4-203ENST00000460112 Q0VG73 95 aa7.3□□□□□ -1.24
SHROOM4-203ENST00000460112 WBP1Q96G27 269 aa7.3□□□□□ -1.24
SHROOM4-203ENST00000460112 IGHV1-18A0A0C4DH31 117 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms