RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 LYPD1Q8N2G4 141 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 AAMDCQ9H7C9 122 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 ARL6IP6Q8N6S5 226 aa7.91□□□□□ -1.14
UBR4-208ENST00000459947 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
UBR4-208ENST00000459947 APRG1Q8IVJ8 170 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 ZNF738Q8NE65 137 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 UHRF2Q96PU4 802 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 WFDC10AQ9H1F0 79 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 SELENOKQ9Y6D0 94 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 RPL35AP18077 110 aaKnown RBP7.9□□□□□ -1.14
UBR4-208ENST00000459947 KCNRGQ8N5I3 272 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 RNF183Q96D59 192 aa7.9□□□□□ -1.14
UBR4-208ENST00000459947 RNF222A6NCQ9 220 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 A8MTW9 85 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 IGLC2P0DOY2 106 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 TSPOP30536 169 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 FAM74A1Q5RGS3 127 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 PAXXQ9BUH6 204 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 OR51M1Q9H341 326 aa7.9□□□□□ -1.15
UBR4-208ENST00000459947 H3BMM0 161 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 ACTR3CQ9C0K3 210 aaPredicted RBP7.89□□□□□ -1.15
UBR4-208ENST00000459947 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
UBR4-208ENST00000459947 CMYA5Q8N3K9 4069 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 EIF5AL1Q6IS14 154 aaKnown RBP7.89□□□□□ -1.15
UBR4-208ENST00000459947 ODF3Q96PU9 254 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 WFDC1Q9HC57 220 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 A0A0J9YX75 114 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 ARPC5O15511 151 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 CA1P00915 261 aaPredicted RBP7.89□□□□□ -1.15
UBR4-208ENST00000459947 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 FAM24BQ8N5W8 94 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 OR10J6PQ8NGY7 276 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 PPP1R14DQ9NXH3 145 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 VWFP04275 2813 aa7.89□□□□□ -1.15
UBR4-208ENST00000459947 CSN1S1P47710 185 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 ATP6V0CP27449 155 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 TRBV19A0A075B6N1 114 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 KNCNA6PVL3 124 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 CDC34P49427 236 aaPredicted RBP7.88□□□□□ -1.15
UBR4-208ENST00000459947 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 C20orf144Q9BQM9 153 aa7.88□□□□□ -1.15
UBR4-208ENST00000459947 NOTCH1P46531 2555 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 SMIM9A6NGZ8 99 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 BCL2L11O43521 198 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 OR7C2O60412 319 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 HSD17B11Q8NBQ5 300 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 RXFP4Q8TDU9 374 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 TMEM167BQ9NRX6 74 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 DPPA3Q6W0C5 159 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 RPUSD4Q96CM3 377 aaKnown RBP7.87□□□□□ -1.15
UBR4-208ENST00000459947 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 NBEAP1P0C6P0 100 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 LEPP41159 167 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
UBR4-208ENST00000459947 OR8A1Q8NGG7 326 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 RNF141Q8WVD5 230 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 SLC25A2Q9BXI2 301 aa7.87□□□□□ -1.15
UBR4-208ENST00000459947 SERTM2A0A1B0GWG4 89 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 TMEM189A5PLL7 270 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 C1QBP02746 253 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 MIR17HGQ75NE6 70 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 NEU1Q99519 415 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 C11orf68Q9H3H3 251 aaKnown RBP7.86□□□□□ -1.15
UBR4-208ENST00000459947 TRAV8-2A0A0B4J237 113 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
UBR4-208ENST00000459947 C3orf84H3BNL1 204 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 MIFP14174 115 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 STOML3Q8TAV4 291 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 SAT2Q96F10 170 aaPredicted RBP7.86□□□□□ -1.15
UBR4-208ENST00000459947 FAM167A-AS1Q96KT0 104 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 OVOL2Q9BRP0 275 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 TRBV7-9A0A0J9YWB2 115 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 BOLA2-SMG1P6H3BVE0 249 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 Q5BKY6 102 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 RPL7L1Q6DKI1 246 aaKnown RBP7.86□□□□□ -1.15
UBR4-208ENST00000459947 FAM122CQ6P4D5 195 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 PKD1L1Q8TDX9 2849 aa7.86□□□□□ -1.15
UBR4-208ENST00000459947 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 G3V3Q6 166 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 CXorf1O96002 111 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
UBR4-208ENST00000459947 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 TPT1P13693 172 aaKnown RBP7.85□□□□□ -1.15
UBR4-208ENST00000459947 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.85□□□□□ -1.15
UBR4-208ENST00000459947 RFNGQ9Y644 331 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 TRRAPQ9Y4A5 3859 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms