RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 TMEM14CQ9P0S9 112 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 F6UB75 175 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 C1QBP02746 253 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 M6PRP20645 277 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 C4BPBP20851 252 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 ID1P41134 155 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 FAM122CQ6P4D5 195 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF503Q96F45 646 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF331Q9NQX6 463 aaPredicted RBP9.44□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
COL18A1-206ENST00000459895 TAAR5O14804 337 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 OR7C2O60412 319 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 OR10J4P0C629 311 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 APOC4P55056 127 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 RHOBP62745 196 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
COL18A1-206ENST00000459895 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
COL18A1-206ENST00000459895 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 SSX7Q7RTT5 188 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 STHQ8IWL8 128 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 GNPNAT1Q96EK6 184 aaPredicted RBP9.43□□□□□ -0.9
COL18A1-206ENST00000459895 SPATA25Q9BR10 227 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
COL18A1-206ENST00000459895 AGRNO00468 2067 aa9.43□□□□□ -0.9
COL18A1-206ENST00000459895 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 JTBO76095 146 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
COL18A1-206ENST00000459895 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
COL18A1-206ENST00000459895 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 OR10G4Q8NGN3 311 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 OR10G9Q8NGN4 311 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 OR10G7Q8NGN6 311 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 SAT2Q96F10 170 aaPredicted RBP9.42□□□□□ -0.9
COL18A1-206ENST00000459895 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 RPRMQ9NS64 109 aa9.42□□□□□ -0.9
COL18A1-206ENST00000459895 A0A0D9SG52 128 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 KIR2DL5BA0A0G2JN68 375 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 KIR2DL5BA0A0G2JPC4 375 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 A0A0J9YX75 114 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 H3BMM0 161 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
COL18A1-206ENST00000459895 PFDN1O60925 122 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 NDUFB4O95168 129 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 HIST1H1EP10412 219 aaKnown RBP9.41□□□□□ -0.9
COL18A1-206ENST00000459895 GUK1Q16774 197 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
COL18A1-206ENST00000459895 KIR2DL5BQ8NHK3 375 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 LRRC20Q8TCA0 184 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF471Q9BX82 626 aaPredicted RBP9.41□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF253O75346 499 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 SPP1P10451 314 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 TAS2R45P59539 299 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 SERF2P84101 59 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 PDE6HQ13956 83 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ZNF726P1Q15940 193 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ZFP69Q49AA0 526 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 C9orf62Q8N4C0 152 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 ZMAT4Q9H898 229 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 U3KQK5 164 aa9.4□□□□□ -0.9
COL18A1-206ENST00000459895 DNAH7Q8WXX0 4024 aa9.39□□□□□ -0.91
COL18A1-206ENST00000459895 M0R3E3 92 aa9.39□□□□□ -0.91
COL18A1-206ENST00000459895 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
COL18A1-206ENST00000459895 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
COL18A1-206ENST00000459895 PSG3Q16557 428 aa9.39□□□□□ -0.91
COL18A1-206ENST00000459895 LGALSLQ3ZCW2 172 aaPredicted RBP9.39□□□□□ -0.91
COL18A1-206ENST00000459895 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
COL18A1-206ENST00000459895 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
COL18A1-206ENST00000459895 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
COL18A1-206ENST00000459895 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 A8MTW9 85 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
COL18A1-206ENST00000459895 PRAC2D3DTV9 90 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 MBP02144 154 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
COL18A1-206ENST00000459895 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
COL18A1-206ENST00000459895 FXYD7P58549 80 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 324.4 ms