RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MIFP14174 115 aa11.78□□□□□ -0.52
CD28-203ENST00000458610 C4BPBP20851 252 aa11.78□□□□□ -0.52
CD28-203ENST00000458610 GDF5OSQ5U4N7 250 aa11.78□□□□□ -0.52
CD28-203ENST00000458610 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
CD28-203ENST00000458610 MRPL32Q9BYC8 188 aaKnown RBP11.78□□□□□ -0.52
CD28-203ENST00000458610 ZNF331Q9NQX6 463 aaPredicted RBP11.78□□□□□ -0.52
CD28-203ENST00000458610 XCL2Q9UBD3 114 aa11.78□□□□□ -0.52
CD28-203ENST00000458610 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 F6UB75 175 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 ZNF266Q14584 549 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 AQP10Q96PS8 301 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 C11orf68Q9H3H3 251 aaKnown RBP11.77□□□□□ -0.53
CD28-203ENST00000458610 PPP1R14DQ9NXH3 145 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 NBEAL2Q6ZNJ1 2754 aa11.77□□□□□ -0.53
CD28-203ENST00000458610 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
CD28-203ENST00000458610 ZNF253O75346 499 aa11.76□□□□□ -0.53
CD28-203ENST00000458610 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
CD28-203ENST00000458610 DEFB1P60022 68 aa11.76□□□□□ -0.53
CD28-203ENST00000458610 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
CD28-203ENST00000458610 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
CD28-203ENST00000458610 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
CD28-203ENST00000458610 TIMM9Q9Y5J7 89 aa11.76□□□□□ -0.53
CD28-203ENST00000458610 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
CD28-203ENST00000458610 FFAR4Q5NUL3 377 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 TENM3Q9P273 2699 aa11.75□□□□□ -0.53
CD28-203ENST00000458610 AGRNO00468 2067 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 A8MTW9 85 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 H3BQ15 152 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 RHOBP62745 196 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 HIST1H1AQ02539 215 aaPredicted RBP11.74□□□□□ -0.53
CD28-203ENST00000458610 PDE6HQ13956 83 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
CD28-203ENST00000458610 NEU1Q99519 415 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 FUT9Q9Y231 359 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 PRELID1Q9Y255 219 aa11.74□□□□□ -0.53
CD28-203ENST00000458610 HUWE1Q7Z6Z7 4374 aaKnown RBP11.73□□□□□ -0.53
CD28-203ENST00000458610 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 CXorf65A6NEN9 183 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 SNRPCP09234 159 aaKnown RBP11.73□□□□□ -0.53
CD28-203ENST00000458610 FXYD7P58549 80 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 TAS2R45P59539 299 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 ACOT6Q3I5F7 207 aaPredicted RBP11.73□□□□□ -0.53
CD28-203ENST00000458610 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 C11orf45Q8TAV5 145 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 AAMDCQ9H7C9 122 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 WFDC1Q9HC57 220 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
CD28-203ENST00000458610 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 H3BTX0 84 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 HLA-DMBP28068 263 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 ZNF705AQ6ZN79 300 aaPredicted RBP11.72□□□□□ -0.53
CD28-203ENST00000458610 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 MRPL53Q96EL3 112 aaKnown RBP11.72□□□□□ -0.53
CD28-203ENST00000458610 IGF2BP2-AS1Q96M15 143 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 PAXXQ9BUH6 204 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 X6R8D5 127 aa11.72□□□□□ -0.53
CD28-203ENST00000458610 BORCS7-ASMTA0A0B4J1R7 106 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 IGHV4-28A0A0C4DH34 117 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 A0A1W2PPV4 95 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 TMEM189A5PLL7 270 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 TSPOP30536 169 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 Q5BKY6 102 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 AMTNQ6UX39 209 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 Q8NAQ8 132 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.53
CD28-203ENST00000458610 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 SLC17A3O00476 420 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 OR7C2O60412 319 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 INSP01308 110 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 MBP02144 154 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
CD28-203ENST00000458610 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
CD28-203ENST00000458610 PYYP10082 97 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 M6PRP20645 277 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 BLNKQ8WV28 456 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 RNF141Q8WVD5 230 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
CD28-203ENST00000458610 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
CD28-203ENST00000458610 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
CD28-203ENST00000458610 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
CD28-203ENST00000458610 DEFB4AO15263 64 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 PFDN1O60925 122 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms