RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ARL14EPLP0DKL9 152 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 CD81P60033 236 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 ALKAL2Q6UX46 152 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 FAM213BQ8TBF2 198 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
TRIM39-211ENST00000458516 SLC17A3O00476 420 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 RAB5CP51148 216 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 UBE2L3P68036 154 aaKnown RBP12.55□□□□□ -0.4
TRIM39-211ENST00000458516 LCN15Q6UWW0 184 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 GTSCR1Q86UQ5 136 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-211ENST00000458516 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-211ENST00000458516 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
TRIM39-211ENST00000458516 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 TRAV8-2A0A0B4J237 113 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 MAP1LC3B2A6NCE7 125 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 ISLRO14498 428 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 PRB2P02812 416 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-211ENST00000458516 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 PSMB3P49720 205 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 GUK1Q16774 197 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 Q8N1Y9 231 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 MAP1LC3BQ9GZQ8 125 aa12.54□□□□□ -0.4
TRIM39-211ENST00000458516 ZNF331Q9NQX6 463 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-211ENST00000458516 ZNF253O75346 499 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 NDUFB4O95168 129 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 CXorf1O96002 111 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 NBEAP1P0C6P0 100 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 GCHFRP30047 84 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-211ENST00000458516 PDE6HQ13956 83 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 BLNKQ8WV28 456 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 C20orf173Q96LM9 149 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 SLC50A1Q9BRV3 221 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 AGRNO00468 2067 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 NBEAL1Q6ZS30 2694 aa12.53□□□□□ -0.4
TRIM39-211ENST00000458516 HLA-DMBP28068 263 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 ID1P41134 155 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 DEFB131AP59861 70 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 SNRPD3P62318 126 aaKnown RBP12.52□□□□□ -0.41
TRIM39-211ENST00000458516 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 RNF182Q8N6D2 247 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 SUN5Q8TC36 379 aa12.52□□□□□ -0.41
TRIM39-211ENST00000458516 OR11H12B2RN74 326 aa12.51□□□□□ -0.41
TRIM39-211ENST00000458516 ZNF124Q15973 351 aa12.51□□□□□ -0.41
TRIM39-211ENST00000458516 PSMG4Q5JS54 123 aa12.51□□□□□ -0.41
TRIM39-211ENST00000458516 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
TRIM39-211ENST00000458516 K7EIL1 84 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 H2AFB1P0C5Y9 115 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 CMC4P56277 68 aaPredicted RBP12.5□□□□□ -0.41
TRIM39-211ENST00000458516 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 TMPRSS5Q9H3S3 457 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
TRIM39-211ENST00000458516 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-211ENST00000458516 PSG9Q00887 426 aa12.49□□□□□ -0.41
TRIM39-211ENST00000458516 PSG3Q16557 428 aa12.49□□□□□ -0.41
TRIM39-211ENST00000458516 IQCF2Q8IXL9 164 aa12.49□□□□□ -0.41
TRIM39-211ENST00000458516 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
TRIM39-211ENST00000458516 CITED4Q96RK1 184 aa12.49□□□□□ -0.41
TRIM39-211ENST00000458516 A0A1B0GV50 99 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 DEFB1P60022 68 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 EXOC3-AS1Q8N2X6 119 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 ZNF680Q8NEM1 530 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 Q9H3A6 140 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
TRIM39-211ENST00000458516 TRAV1-1A0A0B4J248 108 aa12.47□□□□□ -0.41
TRIM39-211ENST00000458516 RANP62826 216 aaKnown RBP12.47□□□□□ -0.41
TRIM39-211ENST00000458516 LYPD1Q8N2G4 141 aa12.47□□□□□ -0.41
TRIM39-211ENST00000458516 ZNF738Q8NE65 137 aa12.47□□□□□ -0.41
TRIM39-211ENST00000458516 SRD5A3Q9H8P0 318 aa12.47□□□□□ -0.41
TRIM39-211ENST00000458516 KNCNA6PVL3 124 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
TRIM39-211ENST00000458516 M0R3E3 92 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 IGHV4-30-4P0DP06 118 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 ICAM4Q14773 271 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.41
TRIM39-211ENST00000458516 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
TRIM39-211ENST00000458516 F6UB75 175 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 IFNA7P01567 189 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 HBE1P02100 147 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 PRB4P10163 310 aaPredicted RBP12.45□□□□□ -0.42
TRIM39-211ENST00000458516 BLOC1S1P78537 153 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 CCL20P78556 96 aa12.45□□□□□ -0.42
TRIM39-211ENST00000458516 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms